Immunogenicity 1858

summary
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
API5
Transcript ID
ENST00000526394
HLA INFO
C*06:02
TCR INFO

No TCR info found!

T cell Tumor cell C*06:02
sequence
Full length protein sequence (294 aa)
AIKFL
1
STKLK
6
TLPDE
11
VLTKE
16
VEELI
21
LTESK
26
KVLED
31
VTGEE
36
FVLFM
41
KILSG
46
LKSLQ
51
TVSGR
56
QQLVE
61
LVAEQ
66
ADLEQ
71
TFNPS
76
DPDCV
81
DRLLQ
86
CTRQA
91
VPLFS
96
VLKLL
101
AEMSS
106
FCGDM
111
EKLET
116
NLRKL
121
FDKLL
126
EYMPL
131
PPEEA
136
ENGEN
141
AGNEE
146
PKLQF
151
SYVEC
156
LLYSF
161
HQLGR
166
KLPDF
171
LTAKL
176
NAEKL
181
KDFKI
186
RLQYF
191
ARGLQ
196
VYIRQ
201
LRLAL
206
QGKTG
211
EALKT
216
EENKI
221
KVVAL
226
KITNN
231
INVLI
236
KDLFH
241
IPPSY
246
KSTVT
251
LSWKP
256
VQKVE
261
IGQKR
266
ASEDT
271
TSGSP
276
PKKSS
281
AGPKR
286
DARQ
291
Mutation Information
DNA mutation:
None
Peptide Range:
81 ~ 105
Mut AA position:
93 (13 in Wild Type peptide)
Alignment
Wild Type:
"DPDCVDRLLQCTRQAVPLFSVLKLL
||||||||||||.||||||||||||
Mutant:
DPDCVDRLLQCTQQAVPLFSVLKLL"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000166181

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay