Immunogenicity 1860

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
TEX13A
Transcript ID
ENST00000372578
HLA INFO
DRB*07:01
TCR INFO

No TCR info found!

T cell Tumor cell DRB*07:01
sequence
Full length protein sequence (352 aa)
MALRP
1
EDPSS
6
GFRHS
11
NVVAF
16
INEKM
21
ARHTK
26
GPEFY
31
LENIS
36
LSWEK
41
VEDKL
46
RAILE
51
DSEVP
56
SEVKE
61
ACTWG
66
SLALG
71
VRFAH
76
RQAQL
81
QRHRV
86
RWLHG
91
FAKLH
96
KSAAQ
101
ALASD
106
LKKLR
111
EQQET
116
ERKEA
121
ASRLR
126
MAQTS
131
LVEVQ
136
KERDK
141
ELVSP
146
HEWEQ
151
GAGWP
156
GLATA
161
GGVCT
166
EGAAE
171
EEEEA
176
AVAAA
181
GAAGG
186
KGAEE
191
EQRGC
196
WRLWL
201
PLWRP
206
WLPLW
211
RLGLP
216
PWRPS
221
SPTWR
226
PGLPP
231
WRPQR
236
SWRES
241
SCSSL
246
EMLIR
251
KSTPI
256
GGRRR
261
EISGR
266
SKQPH
271
LISLE
276
PRTPG
281
PEPHQ
286
NLFLS
291
SSLPH
296
THTHT
301
QALFP
306
PSQTY
311
PLYPL
316
HKQQS
321
QHQFR
326
LSCLP
331
TGRPL
336
ILACG
341
LMGGP
346
TE
351
Mutation Information
DNA mutation:
None
Peptide Range:
108 ~ 132
Mut AA position:
120 (13 in Wild Type peptide)
Alignment
Wild Type:
"ASDLKKLREQQETERKEAASRLRMA
||||||||||||.||||||||||||
Mutant:
ASDLKKLREQQEMERKEAASRLRMA"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) TEX13A

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay