Immunogenicity 1879

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
RNF217
Transcript ID
ENST00000560949
HLA INFO
B*44:03
TCR INFO

No TCR info found!

T cell Tumor cell B*44:03
sequence
Full length protein sequence (307 aa)
MPSLL
1
GAPPY
6
SGLGG
11
VGDPY
16
VPLMV
21
LMCRV
26
CLEDK
31
PIKPL
36
PCCKK
41
AVCEE
46
CLKVY
51
LSAQV
56
QLGQV
61
EIKCP
66
ITECF
71
EFLEE
76
TTVVY
81
NLTHE
86
DSIKY
91
KYFLE
96
LGRID
101
SSTKP
106
CPQCK
111
HFTTF
116
KKKGH
121
IPTPS
126
RSESK
131
YKIQC
136
PTCQF
141
VWCFK
146
CHSPW
151
HEGVN
156
CKEYK
161
KGDKL
166
LRHWA
171
SEIEH
176
GQRNA
181
QKCPK
186
CKIHI
191
QRTEG
196
CDHMT
201
CSQCN
206
TNFCY
211
RCGER
216
YRQLR
221
FFGDH
226
TSNLS
231
IFGCK
236
YRYLP
241
ERPHL
246
RRLVR
251
GSVCA
256
GKLFI
261
APLIM
266
VLGLA
271
LGAIA
276
VVIGL
281
FVFPI
286
YCLCK
291
KQRKR
296
SRTGM
301
HW
306
Mutation Information
DNA mutation:
None
Peptide Range:
252 ~ 276
Mut AA position:
264 (13 in Wild Type peptide)
Alignment
Wild Type:
"RLVRGSVCAGKLFIAPLIMVLGLAL
||||||||||||.||||||||||||
Mutant:
RLVRGSVCAGKLLIAPLIMVLGLAL"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) RNF217

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay