Immunogenicity 1933

summary
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
ABR
Transcript ID
ENST00000573559
HLA INFO
A*02:01
TCR INFO

No TCR info found!

T cell Tumor cell A*02:01
sequence
Full length protein sequence (177 aa)
MLLRV
1
KSVQC
6
LPERG
11
LAMER
16
FQSEG
21
SCRPH
26
DNKDI
31
LLMLS
36
DMDIN
41
AIAGT
46
LKLYF
51
RELPE
56
PLLTD
61
RLYPA
66
FMEGI
71
ALSDP
76
AAKEN
81
CMMHL
86
LRSLP
91
DPNLI
96
TFLFL
101
LEHLK
106
RVAEK
111
EPINK
116
MSLHN
121
LATVF
126
GPTLL
131
RPSEV
136
ESKAH
141
LTSAA
146
DIWSH
151
DVMAQ
156
VQVLL
161
YYLQH
166
PPISF
171
AE
176
Mutation Information
DNA mutation:
None
Peptide Range:
5 ~ 29
Mut AA position:
17 (13 in Wild Type peptide)
Alignment
Wild Type:
"VKSVQCLPERGLAMERFQSEGSCRP
||||||||||||.||||||||||||
Mutant:
VKSVQCLPERGLVMERFQSEGSCRP"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000159842

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay