Immunogenicity 1945

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
FAM118A
Transcript ID
ENST00000405673
HLA INFO
DRB*15:02
TCR INFO

No TCR info found!

T cell Tumor cell DRB*15:02
sequence
Full length protein sequence (202 aa)
MDSVE
1
KTTNR
6
SEQKS
11
RKFLK
16
SLIRK
21
QPQEL
26
LLVIG
31
TGVSA
36
AVAPG
41
IPALC
46
SWRSC
51
IEAVI
56
EAAEQ
61
LEVLH
66
PGDVA
71
EFRRK
76
VTKDR
81
DLLVV
86
AHDLI
91
RKMSP
96
RTGDA
101
KPSFF
106
QDCLM
111
EVFDD
116
LEQHI
121
RSPVV
126
LQSIL
131
SLMDR
136
GAMVL
141
TTNYD
146
NLLEA
151
FGRRQ
156
NKPME
161
SLDLK
166
DKTKV
171
WAGAA
176
GSLQV
181
WGVLC
186
PGSCS
191
HFVAV
196
NY
201
Mutation Information
DNA mutation:
None
Peptide Range:
167 ~ 191
Mut AA position:
179 (13 in Wild Type peptide)
Alignment
Wild Type:
"LDLKDKTKVWAGAAGSLQVWGVLCP
||||||||||||.||||||||||||
Mutant:
LDLKDKTKVWAGGAGSLQVWGVLCP"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000100376

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay