Immunogenicity 1961

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
IER3
Transcript ID
ENST00000259874
HLA INFO
A*29:02
TCR INFO

No TCR info found!

T cell Tumor cell A*29:02
sequence
Full length protein sequence (156 aa)
MCHSR
1
SCHPT
6
MTILQ
11
APTPA
16
PSTIP
21
GPRRG
26
SGPEI
31
FTFDP
36
LPEPA
41
AAPAG
46
RPSAS
51
RGHRK
56
RSRRV
61
LYPRV
66
VRRQL
71
PVEEP
76
NPAKR
81
LLFLL
86
LTIVF
91
CQILM
96
AEEGV
101
PAPLP
106
PEDAP
111
NAASL
116
APTPV
121
SAVLE
126
PFNLT
131
SEPSD
136
YALDL
141
STFLQ
146
QHPAA
151
F
156
Mutation Information
DNA mutation:
None
Peptide Range:
15 ~ 39
Mut AA position:
27 (13 in Wild Type peptide)
Alignment
Wild Type:
"QAPTPAPSTIPGPRRGSGPEIFTFD
||||||||||||.||||||||||||
Mutant:
QAPTPAPSTIPGLRRGSGPEIFTFD"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) IER3

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay