Immunogenicity 2012

summary
Sample ID
4069
Response
Negative
Tumor Type
Pancreatic cancer
Gene Symbol
NT5C1B
Transcript ID
ENST00000406971
HLA INFO
B*38:01
TCR INFO

No TCR info found!

T cell Tumor cell B*38:01
sequence
Full length protein sequence (203 aa)
MSQTS
1
LKQKK
6
NEPGM
11
RSSKE
16
SLEAE
21
KRKES
26
DKTGV
31
RLSNQ
36
GSQES
41
SLRKT
46
DSRGY
51
LVRSQ
56
WSRIS
61
RSPST
66
KAPSI
71
DEPRS
76
RNTSA
81
KVELP
86
SSPRS
91
SHPRR
96
PSCPG
101
RWTRG
106
LPRPQ
111
SPILA
116
PGAAP
121
KCKRI
126
RRPGP
131
KASCG
136
KSARP
141
GTRSR
146
WNIRA
151
RPPPS
156
GSPPA
161
SAGGS
166
TPPPP
171
SWTAT
176
LCPSS
181
SSSSG
186
RTRTT
191
TRLPT
196
GHP
201
Mutation Information
DNA mutation:
None
Peptide Range:
159 ~ 183
Mut AA position:
171 (13 in Wild Type peptide)
Alignment
Wild Type:
"PSGSPPASAGGSTPPPPSWTATLCP
||||||||||||.||||||||||||
Mutant:
PSGSPPASAGGSPPPPPSWTATLCP"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ENSG00000185013

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay