Immunogenicity 2089

summary
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
GIPC3
Transcript ID
ENST00000322315
HLA INFO
C*07:01
TCR INFO

No TCR info found!

T cell Tumor cell C*07:01
sequence
Full length protein sequence (312 aa)
MEGAA
1
AREAR
6
GTETP
11
RASAP
16
PPAPS
21
EPPAA
26
PRARP
31
RLVFR
36
TQLAH
41
GSPTG
46
KIEGF
51
TNVRE
56
LYAKI
61
AEAFG
66
IAPTE
71
ILFCT
76
LNSHK
81
VDMQK
86
LLGGQ
91
IGLED
96
FIFAH
101
VRGET
106
KEVEV
111
TKTED
116
ALGLT
121
ITDNG
126
AGYAF
131
IKRIK
136
EGSII
141
NRIEA
146
VCVGD
151
SIEAI
156
NDHSI
161
VGCRH
166
YEVAK
171
MLREL
176
PKSQP
181
FTLRL
186
VQPKR
191
AFDMI
196
GQRSR
201
SSKCP
206
VEAKV
211
TSGRE
216
TLRLR
221
SGGAA
226
TVEEA
231
PSEFE
236
EEASR
241
KVDDL
246
LESYM
251
GIRDP
256
ELAST
261
MVETS
266
KKTAS
271
AQEFA
276
RCLDS
281
VLGEF
286
AFPDE
291
FVVEV
296
WAAIG
301
EAREA
306
CG
311
Mutation Information
DNA mutation:
None
Peptide Range:
277 ~ 301
Mut AA position:
289 (13 in Wild Type peptide)
Alignment
Wild Type:
"QEFARCLDSVLGEFAFPDEFVVEVW
||||||||||||.||||||||||||
Mutant:
QEFARCLDSVLGGFAFPDEFVVEVW"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) GIPC3

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay