Immunogenicity 2174

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
OR5AP2
Transcript ID
ENST00000302981
HLA INFO
DQA*02:01 / DQB*02:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*02:01 DQB*02:02
sequence
Full length protein sequence (316 aa)
MRLMK
1
EVRGR
6
NQTEV
11
TEFLL
16
LGLSD
21
NPDLQ
26
GVLFA
31
LFLLI
36
YMANM
41
VGNLG
46
MIVLI
51
KIDLC
56
LHTPM
61
YFFLS
66
SLSFV
71
DASYS
76
SSVTP
81
KMLVN
86
LMAEN
91
KAISF
96
HGCAA
101
QFYFF
106
GSFLG
111
TECFL
116
LAMMA
121
YDRYA
126
AIWNP
131
LLYPV
136
LVSGR
141
ICFLL
146
IATSF
151
LAGCG
156
NAAIH
161
TGMTF
166
RLSFC
171
GSNRI
176
NHFYC
181
DTPPL
186
LKLSC
191
SDTHF
196
NGIVI
201
MAFSS
206
FIVIS
211
CVMIV
216
LISYL
221
CIFIA
226
VLKMP
231
SLEGR
236
HKAFS
241
TCASY
246
LMAVT
251
IFFGT
256
ILFMY
261
LRPTS
266
SYSME
271
QDKVV
276
SVFYT
281
VIIPV
286
LNPLI
291
YSLKN
296
KDVKK
301
ALKKI
306
LWKHI
311
L
316
Mutation Information
DNA mutation:
None
Peptide Range:
30 ~ 54
Mut AA position:
42 (13 in Wild Type peptide)
Alignment
Wild Type:
"QGVLFALFLLIYMANMVGNLGMIVL
||||||||||||.||||||||||||
Mutant:
QGVLFALFLLIYVANMVGNLGMIVL"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) OR5AP2

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay