Immunogenicity 2357

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
ACAP3
Transcript ID
uc001aec.1
HLA INFO
B*18:01
TCR INFO

No TCR info found!

T cell Tumor cell B*18:01
sequence
Full length protein sequence (255 aa)
MVEAG
1
KAYVS
6
TSRLF
11
VSGVR
16
DLSQQ
21
CQGDT
26
VISEC
31
LQRFA
36
DSLQE
41
VVNYH
46
MILFD
51
QAQRS
56
VRQQL
61
QSFVK
66
EDVRK
71
FKETK
76
KQFDK
81
VREDL
86
ELSLV
91
RNAQA
96
PRHRP
101
HEVEE
106
ATGAL
111
TLTRK
116
CFRHL
121
ALDYV
126
LQINV
131
LQAKK
136
KFEIL
141
DSMLS
146
FMHAQ
151
SSFFQ
156
QGYSL
161
LHQLD
166
PYMKK
171
LAAEL
176
DQLVI
181
DSAVE
186
KREME
191
RKHAA
196
IQQRV
201
RPRSR
206
LPAHQ
211
APGRP
216
LRPHP
221
MPGTP
226
SPPLP
231
PACLP
236
PALPT
241
PSLGD
246
QGCSL
251
Mutation Information
DNA mutation:
None
Peptide Range:
219 ~ 243
Mut AA position:
231 (13 in Wild Type peptide)
Alignment
Wild Type:
"RPLRPHPMPGTPSPPLPPACLPPAL
||||||||||||.||||||||||||
Mutant:
RPLRPHPMPGTPPPPLPPACLPPAL"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ACAP3

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay