Immunogenicity 260

Sample ID
4196
Response
Negative
Tumor Type
Colorectal cancer
Gene Symbol
RTEL1
Transcript ID
uc011abe.1

HLA INFO
A*02:01
TCR INFO

No TCR info found!

T cell Tumor cell A*02:01
Full length protein sequence (996 aa)
MPYNY
1
LLDAK
6
SRRAH
11
NIDLK
16
GTVVI
21
FDEAH
26
NVEKM
31
CEESA
36
SFDLT
41
PHDLA
46
SGLDV
51
IDQVL
56
EEQTK
61
AAQQG
66
EPHPE
71
FSADS
76
PSPGL
81
NMELE
86
DIAKL
91
KMILL
96
RLEGA
101
IDAVE
106
LPGDD
111
SGVTK
116
PGSYI
121
FELFA
126
EAQIT
131
FQTKG
136
CILDS
141
LDQII
146
QHLAG
151
RAGVF
156
TNTAG
161
LQKLA
166
DIIQI
171
VFSVD
176
PSEGS
181
PGSPA
186
GLGAL
191
QSYKV
196
HIHPD
201
AGHRR
206
TAQRS
211
DAWST
216
TAARK
221
RGKVL
226
SYWCF
231
SPGHS
236
MHELV
241
RQGVR
246
SLILT
251
SGTLA
256
PVSSF
261
ALEMQ
266
IPFPV
271
CLENP
276
HIIDK
281
HQIWV
286
GVVPR
291
GPDGA
296
QLSSA
301
FDRRF
306
SEECL
311
SSLGK
316
ALGNI
321
ARVVP
326
YGLLI
331
FFPSY
336
PVMEK
341
SLEFW
346
RARDL
351
ARKME
356
ALKPL
361
FVEPR
366
SKGSF
371
SETIS
376
AYYAR
381
VAAPG
386
STGAT
391
FLAVC
396
RGKAS
401
EGLDF
406
SDTNG
411
RGVIV
416
TGLPY
421
PPRMD
426
PRVVL
431
KMQFL
436
DEMKG
441
QGGAG
446
GQFLS
451
GQEWY
456
RQQAS
461
RAVNQ
466
AIGRV
471
IRHRQ
476
DYGAV
481
FLCDH
486
RFAFA
491
DARAQ
496
LPSWV
501
RPHVR
506
VYDNF
511
GHVIR
516
DVAQF
521
FRVAE
526
RTMPA
531
PAPRA
536
TAPSV
541
RGEDA
546
VSEAK
551
SPGPF
556
FSTRK
561
AKSLD
566
LHVPS
571
LKQRS
576
SGSPA
581
AGDPE
586
SSLCV
591
EYEQE
596
PVPAR
601
QRPRG
606
LLAAL
611
EHSEQ
616
RAGSP
621
GEEQA
626
HSCST
631
LSLLS
636
EKRPA
641
EEPRG
646
GRKKI
651
RLVSH
656
PEEPV
661
AGAQT
666
DRAKL
671
FMVAV
676
KQELS
681
QANFA
686
TFTQA
691
LQDYK
696
GSDDF
701
AALAA
706
CLGPL
711
FAEDP
716
KKHNL
721
LQGFY
726
QFVRP
731
HHKQQ
736
FEEVC
741
IQLTG
746
RGCGY
751
RPEHS
756
IPRRQ
761
RAQPV
766
LDPTG
771
RTAPD
776
PKLTV
781
STAAA
786
QQLDP
791
QEHLN
796
QGRPH
801
LSPRP
806
PPTGD
811
PGSQP
816
QWGSG
821
VPRAG
826
KQGQH
831
AVSAY
836
LADAR
841
RALGS
846
AGCSQ
851
LLAAL
856
TAYKQ
861
DDDLD
866
KVLAV
871
LAALT
876
TAKPE
881
DFPLL
886
HRFSM
891
FVRPH
896
HKQRF
901
SQTCT
906
DLTGR
911
PYPGM
916
EPPGP
921
QEERL
926
AVPPV
931
LTHRA
936
PQPGP
941
SRSEK
946
TGKTQ
951
SKISS
956
FLRQR
961
PAGTV
966
GAGGE
971
DAGPS
976
QSSGP
981
PHGPA
986
ASEWG
991
L
996
Mutation Information
DNA mutation:
c.T1415C
Peptide Range:
460 ~ 484
Mut AA position:
472 (13 in Wild Type peptide)
Alignment
Wild Type:
"YRQQASRAVNQAIGRVIRHRQDYGA
||||||||||||.||||||||||||
Mutant:
YRQQASRAVNQATGRVIRHRQDYGA"
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

minimal_peptide

YRQQASRAVNQATGRVIRHRQDYGA

Antigen Type

TMG

T-cell Source

TILs

APC Type

DSs

Assay

ELISPOT