Immunogenicity 2698

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
CD4
Transcript ID
uc010sfk.2
HLA INFO
B*14:02
TCR INFO

No TCR info found!

T cell Tumor cell B*14:02
sequence
Full length protein sequence (185 aa)
MGKKL
1
PLHLT
6
LPQAL
11
PQYAG
16
SGNLT
21
LALEA
26
KTGKL
31
HQEVN
36
LVVMR
41
ATQLQ
46
KNLTC
51
EVWGP
56
TSPKL
61
MLSLK
66
LENKE
71
AKVSK
76
REKAV
81
WVLNP
86
EAGMW
91
QCLLS
96
DSGQV
101
LLESN
106
IKVLP
111
TWSTP
116
VQPMA
121
LIVLG
126
GVAGL
131
LLFIG
136
LGIFF
141
CVRCR
146
HRRRQ
151
AERMS
156
QIKRL
161
LSEKK
166
TCQCP
171
HRFQK
176
TCSPI
181
Mutation Information
DNA mutation:
None
Peptide Range:
98 ~ 122
Mut AA position:
110 (13 in Wild Type peptide)
Alignment
Wild Type:
"LLSDSGQVLLESNIKVLPTWSTPVQ
||||||||||||.||||||||||||
Mutant:
LLSDSGQVLLESKIKVLPTWSTPVQ"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CD4

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay