Immunogenicity 2744

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
SLCO1A2
Transcript ID
uc001ret.3
HLA INFO
DQA*01:02 / DQB*06:01
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:02 DQB*06:01
sequence
Full length protein sequence (579 aa)
MFLTK
1
NCKQE
6
QERVE
11
SAKMF
16
LLAIT
21
CAFVS
26
KTLSG
31
SYMNS
36
MLTQI
41
ERQFN
46
IPTSL
51
VGFIN
56
GSFEI
61
GNLLL
66
IIFVS
71
YFGTK
76
LHRPI
81
MIGIG
86
CVVMG
91
LGCFL
96
KSLPH
101
FLMNQ
106
YEYES
111
TVSVS
116
GNLSS
121
NSFLC
126
MENGT
131
QILRP
136
TQDPS
141
ECTKE
146
VKSLM
151
WVYVL
156
VGNIV
161
RGMGE
166
TPILP
171
LGISY
176
IEDFA
181
KFENS
186
PLYIG
191
LVETG
196
AIIGP
201
LIGLL
206
LASFC
211
ANVYV
216
DTGFV
221
NTDDL
226
IITPT
231
DTRWV
236
GAWWF
241
GFLIC
246
AGVNV
251
LTAIP
256
FFFLP
261
NTLPK
266
EGLET
271
NADII
276
KNENE
281
DKQKE
286
EVKKE
291
KYGIT
296
KDFLP
301
FMKSL
306
SCNPI
311
YMLFI
316
LVSVI
321
QFNAF
326
VNMIS
331
FMPKY
336
LEQQY
341
GISSS
346
DAIFL
351
MGIYN
356
LPPIC
361
IGYII
366
GGLIM
371
KKFKI
376
TVKQA
381
AHIGC
386
WLSLL
391
EYLLY
396
FLSFL
401
MTCEN
406
SSVVG
411
INTSY
416
EGIPQ
421
DLYVE
426
NDIFA
431
DCNVD
436
CNCPS
441
KIWDP
446
VCGNN
451
GLSYL
456
SACLA
461
GCETS
466
IGTGI
471
NMVFQ
476
NCSCI
481
QTSGN
486
SSAVL
491
GLCDK
496
GPDCS
501
LMLQY
506
FLILS
511
AMSSF
516
IYSLA
521
AIPGY
526
MVLLR
531
CMKSE
536
EKSLG
541
VGLHT
546
FCTRV
551
FGKNS
556
YFFPH
561
PIRTI
566
LLLLF
571
FITL
576
Mutation Information
DNA mutation:
None
Peptide Range:
556 ~ 579
Mut AA position:
568 (13 in Wild Type peptide)
Alignment
Wild Type:
"FGKNSYFFPHPIRTILLLLFFITL
||||||||||||.|||||||||||
Mutant:
FGKNSYFFPHPIGTILLLLFFITL"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SLCO1A2

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay