Immunogenicity 2898

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
CXADRP2
Transcript ID
uc010tzk.1
HLA INFO
DQA*01:02 / DQB*06:01
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:02 DQB*06:01
sequence
Full length protein sequence (192 aa)
MIEKA
1
KGETA
6
YLPCK
11
FTLSP
16
EDQGP
21
LDIEW
26
LISPA
31
DNQKV
36
DQVII
41
LYSGD
46
KNYDD
51
YYPDL
56
KGRVH
61
FKSND
66
LKSGD
71
ASINV
76
TNFQL
81
SDIGT
86
DQCKV
91
KRAPG
96
VANRK
101
IQLVV
106
LGKPS
111
GTRCY
116
VDGSE
121
EIGSD
126
FKLKC
131
EPKEG
136
SLPLQ
141
YEWQK
146
LSDSQ
151
KMPTS
156
WLAEM
161
TSSVI
166
SVKML
171
LLSTL
176
GHTAV
181
HQKQS
186
GL
191
Mutation Information
DNA mutation:
None
Peptide Range:
116 ~ 140
Mut AA position:
128 (13 in Wild Type peptide)
Alignment
Wild Type:
"GTRCYVDGSEEIGSDFKLKCEPKEG
||||||||||||.||||||||||||
Mutant:
GTRCYVDGSEEIESDFKLKCEPKEG"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CXADRP2

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay