Immunogenicity 2945

summary
Sample ID
4069
Response
Negative
Tumor Type
Pancreatic cancer
Gene Symbol
SNUPN
Transcript ID
uc002bas.3
HLA INFO
DQA*01:03 / DQB*03:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:03 DQB*03:02
sequence
Full length protein sequence (360 aa)
MEELS
1
QALAS
6
SFSVS
11
QDLNS
16
TAAPH
21
PRLSQ
26
YKSKY
31
SSLEQ
36
SERRR
41
RLLEL
46
QKSKR
51
LDYVN
56
HARRL
61
AEDDW
66
TGMES
71
EEENK
76
KDDEE
81
MDIDT
86
VKKLP
91
KHYAN
96
QLMLS
101
EWLID
106
VPSDL
111
GQEWI
116
VVVCP
121
VGKRA
126
LIVAS
131
RGSTS
136
AYTKS
141
GYCVN
146
RFSSL
151
LPGGN
156
RRNST
161
AKDYT
166
ILDCI
171
YNEVN
176
QTYYV
181
LDVMC
186
WRGHP
191
FYDCQ
196
TDFRF
201
YWMHS
206
KLPEE
211
EGLGE
216
KTKLN
221
PFKFV
226
GLKNF
231
PCTPE
236
SLCDV
241
LSMDF
246
PFEVD
251
GLLFY
256
HKQTH
261
YSPGS
266
TPLVG
271
WLRPY
276
MVSDV
281
LGVAV
286
PAGPL
291
TTKPD
296
YAGHQ
301
LQQIM
306
EHKKS
311
QKEGM
316
KEKLT
321
HKASE
326
NGHYE
331
LEHLS
336
TPKLK
341
GSSHS
346
PDHPG
351
CLMEN
356
Mutation Information
DNA mutation:
None
Peptide Range:
13 ~ 37
Mut AA position:
25 (13 in Wild Type peptide)
Alignment
Wild Type:
"SVSQDLNSTAAPHPRLSQYKSKYSS
||||||||||||.||||||||||||
Mutant:
SVSQDLNSTAAPPPRLSQYKSKYSS"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SNUPN

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay