Immunogenicity 2980

summary
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
CPEB1
Transcript ID
uc002bip.3
HLA INFO
A*01:01
TCR INFO

No TCR info found!

T cell Tumor cell A*01:01
sequence
Full length protein sequence (335 aa)
MGVGS
1
RMDQE
6
QAALA
11
AVTPS
16
PTSAS
21
KRWPG
26
ASVWP
31
SWDLL
36
EAPKD
41
PFSIE
46
REARL
51
HRQAA
56
AVNEA
61
TCTWS
66
GQLPP
71
RNYKN
76
PIYSC
81
KVFLG
86
GVPWD
91
ITEAG
96
LVNTF
101
RVFGS
106
LSVEW
111
PGKDG
116
KHPRC
121
PPKGY
126
VYLVF
131
ELEKS
136
VRSLL
141
QACSH
146
DPLSP
151
DGLSE
156
YYFKM
161
SSRRM
166
RCKEV
171
QVIPW
176
VLADS
181
NFVRS
186
PSQRL
191
DPSRT
196
VFVGA
201
LHGML
206
NAEAL
211
AAILN
216
DLFGG
221
VVYAG
226
IDTDK
231
HKYPI
236
GSGRV
241
TFNNQ
246
RSYLK
251
AVSAA
256
FVEIK
261
TTKFT
266
KKVQI
271
DPYLE
276
DSLCH
281
ICSSQ
286
PGPFF
291
CRDQV
296
CFKYF
301
CRSCW
306
HWRHS
311
MEGLR
316
HHSPL
321
MRNQK
326
NRDSS
331
Mutation Information
DNA mutation:
None
Peptide Range:
172 ~ 196
Mut AA position:
184 (13 in Wild Type peptide)
Alignment
Wild Type:
"CKEVQVIPWVLADSNFVRSPSQRLD
||||||||||||.||||||||||||
Mutant:
CKEVQVIPWVLANSNFVRSPSQRLD"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CPEB1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay