Immunogenicity 3017

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
SSTR5-AS1
Transcript ID
uc002cko.3
HLA INFO
C*07:02
TCR INFO

No TCR info found!

T cell Tumor cell C*07:02
sequence
Full length protein sequence (363 aa)
MVGER
1
SPGTG
6
AMRAG
11
PHAAA
16
DLDPN
21
CMRLR
26
TPKPG
31
RPRPR
36
PHAAA
41
DPRPR
46
PKLHA
51
AEDPQ
56
ARQTP
61
IQTPR
66
GRGPQ
71
PRQTP
76
THPCS
81
PQPQK
86
SNPSV
91
PQGGP
96
GSLRY
101
SSFLR
106
WPHLQ
111
LQTNQ
116
RRPNG
121
LPKPS
126
RWDPR
131
SREPL
136
PRPRP
141
TATLG
146
LRIRS
151
AKCRG
156
EGPTP
161
PREPN
166
SGNSP
171
SSVHL
176
HPDPP
181
PRPQV
186
HAPFR
191
GDLSG
196
ASGPA
201
ETRGS
206
DGRGP
211
GGNRT
216
ACRSC
221
LRGGC
226
AALNC
231
PRLFI
236
PQPPA
241
ASDPP
246
PAGAA
251
QPFAD
256
AGELE
261
SDHAQ
266
PSHRG
271
ARFGP
276
PTPFP
281
GFITH
286
FSPAL
291
KETPQ
296
MLLHS
301
PTEAG
306
LGCPQ
311
PRALP
316
RTLQA
321
PTGPL
326
PATPR
331
PIPNL
336
HSPCG
341
ASTLW
346
RKDVS
351
KLGGA
356
RPV
361
Mutation Information
DNA mutation:
None
Peptide Range:
215 ~ 239
Mut AA position:
227 (13 in Wild Type peptide)
Alignment
Wild Type:
"PGGNRTACRSCLRGGCAALNCPRLF
||||||||||||.||||||||||||
Mutant:
PGGNRTACRSCLCGGCAALNCPRLF"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SSTR5-AS1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay