Immunogenicity 3079

summary
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
LOC283922
Transcript ID
uc002fcr.2
HLA INFO
A*32:01
TCR INFO

No TCR info found!

T cell Tumor cell A*32:01
sequence
Full length protein sequence (336 aa)
MNSAG
1
LSFGG
6
GAGKY
11
LAEWM
16
VHGYP
21
SENVW
26
ELDLK
31
RFGAL
36
QSSRT
41
FLRHR
46
VMEVM
51
PLMYD
56
LKVPH
61
WDFQT
66
GRQLR
71
TSPLY
76
DRLDA
81
QGARW
86
MEKHG
91
FERPK
96
YFVPP
101
DKDLL
106
ALEQS
111
KTFYK
116
PDWFD
121
IVESE
126
VKCCK
131
EAVCV
136
IDMSS
141
FTEFE
146
ITTTG
151
DQALE
156
VLQYL
161
FSNDL
166
DVPVG
171
HIVHT
176
GMLNE
181
GGGYE
186
NDCSI
191
ARLNK
196
RSFFM
201
ISPTD
206
QQVHC
211
WAWLK
216
KHMPK
221
DSNLL
226
LEDVT
231
WKYTA
236
LNLIG
241
PRAVD
246
VLSEL
251
SYAPM
256
TPDHF
261
PSLFC
266
KEMSV
271
GYANG
276
IRVMS
281
MTHTG
286
EPGFM
291
LYIPI
296
EVRGP
301
PPLPS
306
PPLPH
311
CGVPV
316
LPAAR
321
SPALA
326
GLESC
331
I
336
Mutation Information
DNA mutation:
None
Peptide Range:
301 ~ 325
Mut AA position:
313 (13 in Wild Type peptide)
Alignment
Wild Type:
"EVRGPPPLPSPPLPHCGVPVLPAAR
||||||||||||.||||||||||||
Mutant:
EVRGPPPLPSPPPPHCGVPVLPAAR"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) LOC283922

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay