Immunogenicity 3180

summary
Sample ID
4069
Response
Negative
Tumor Type
Pancreatic cancer
Gene Symbol
SALL3
Transcript ID
uc010dra.3
HLA INFO
DRB*15:02
TCR INFO

No TCR info found!

T cell Tumor cell DRB*15:02
sequence
Full length protein sequence (835 aa)
MKHRK
1
GKPPN
6
VSVFE
11
PKASA
16
EDPFF
21
KHKCR
26
FCAKV
31
FGSDS
36
ALQIH
41
LRSHT
46
GERPF
51
KCNIC
56
GNRFS
61
TKGNL
66
KVHFQ
71
RHKEK
76
YPHIQ
81
MNPYP
86
VPEYL
91
DNVPT
96
CSGIP
101
YGMSL
106
PPEKP
111
VTTWL
116
DSKPV
121
LPTVP
126
TSVGL
131
QLPPT
136
VPGAH
141
GYADS
146
PSATP
151
ASRSP
156
QRPSP
161
ASSEC
166
ASLSP
171
GLNHV
176
ESGVS
181
ATAES
186
PQSLL
191
GGPPL
196
TKAEP
201
VSLPC
206
TNARA
211
GDAPV
216
GAQAS
221
AAPTS
226
VDGAP
231
TSLGS
236
PGLPA
241
VSEQF
246
KAQFP
251
FGGLL
256
DSMQT
261
SETSK
266
LQQLV
271
ENIDK
276
KMTDP
281
NQCVI
286
CHRVL
291
SCQSA
296
LKMHY
301
RTHTG
306
ERPFK
311
CKICG
316
RAFTT
321
KGNLK
326
THFGV
331
HRAKP
336
PLRVQ
341
HSCPI
346
CQKKF
351
TNAVV
356
LQQHI
361
RMHMG
366
GQIPN
371
TPLPE
376
GFQDA
381
MDSEL
386
AYDDK
391
NAETL
396
SSYDD
401
DMDEN
406
SMEDD
411
AELKD
416
AATDP
421
AKPLL
426
SYAGS
431
CPPSP
436
PSVIS
441
SIAAL
446
ENQMK
451
MIDSV
456
MSCQQ
461
LTGLK
466
SVENG
471
SGESD
476
RLSND
481
SSSAV
486
GDLES
491
RSAGS
496
PALSE
501
SSSSQ
506
ALSPA
511
PSNGE
516
SFRSK
521
SPGLG
526
APEEP
531
QEIPL
536
KTERP
541
DSPAA
546
APGSG
551
GAPGR
556
AGIKE
561
EAPFS
566
LLFLS
571
RERGP
576
SQSTP
581
SLISS
586
AAPTM
591
IKMEV
596
NGHGK
601
AMALG
606
EGPPL
611
PAGVQ
616
VPAGP
621
QTVMG
626
PGLAP
631
MLAPP
636
PRRTP
641
KQHNC
646
QSCGK
651
TFSSA
656
SALQI
661
HERTH
666
TGEKP
671
FGCTI
676
CGRAF
681
TTKGN
686
LKVHM
691
GTHMW
696
NNAPA
701
RRGRR
706
LSVEN
711
PMALL
716
GGDAL
721
KFSEM
726
FQKDL
731
AARAM
736
NVDPS
741
FWNQY
746
AAAIT
751
NGLAM
756
KNNEI
761
SVIQN
766
GGIPQ
771
LPVSL
776
GGSAL
781
PPLGS
786
MASGM
791
DKART
796
GSSPP
801
IVSLD
806
KASSE
811
TAASR
816
PFTRF
821
IEDNK
826
EIGIN
831
Mutation Information
DNA mutation:
None
Peptide Range:
214 ~ 238
Mut AA position:
226 (13 in Wild Type peptide)
Alignment
Wild Type:
"RAGDAPVGAQASAAPTSVDGAPTSL
||||||||||||.||||||||||||
Mutant:
RAGDAPVGAQASTAPTSVDGAPTSL"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SALL3

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay