Immunogenicity 3337

summary
Sample ID
4069
Response
Negative
Tumor Type
Pancreatic cancer
Gene Symbol
A1BG
Transcript ID
uc002qsd.4
HLA INFO
A*26:01
TCR INFO

No TCR info found!

T cell Tumor cell A*26:01
sequence
Full length protein sequence (495 aa)
MSMLV
1
VFLLL
6
WGVTW
11
GPVTE
16
AAIFY
21
ETQPS
26
LWAES
31
ESLLK
36
PLANV
41
TLTCQ
46
AHLET
51
PDFQL
56
FKNGV
61
AQEPV
66
HLDSP
71
AIKHQ
76
FLLTG
81
DTQGR
86
YRCRS
91
GLSTG
96
WTQLS
101
KLLEL
106
TGPKS
111
LPAPW
116
LSMAP
121
VSWIT
126
PGLKT
131
TAVCR
136
GVLRG
141
VTFLL
146
RREGD
151
HEFLE
156
VPEAQ
161
EDVEA
166
TFPVH
171
QPGNY
176
SCSYR
181
TDGEG
186
ALSEP
191
SATVT
196
IEELA
201
APPPP
206
VLMHH
211
GESSQ
216
VLHPG
221
NKVTL
226
TCVAP
231
LSGVD
236
FQLRR
241
GEKEL
246
LVPRS
251
STSPD
256
RIFFH
261
LNAVA
266
LGDGG
271
HYTCR
276
YRLHD
281
NQNGW
286
SGDSA
291
PVELI
296
LSDET
301
LPAPE
306
FSPEP
311
ESGRA
316
LRLRC
321
LAPLE
326
GARFA
331
LVRED
336
RGGRR
341
VHRFQ
346
SPAGT
351
EALFE
356
LHNIS
361
VADSA
366
NYSCV
371
YVDLK
376
PPFGG
381
SAPSE
386
RLELH
391
VDGPP
396
PRPQL
401
RATWS
406
GAVLA
411
GRDAV
416
LRCEG
421
PIPDV
426
TFELL
431
REGET
436
KAVKT
441
VRTPG
446
AAANL
451
ELIFV
456
GPQHA
461
GNYRC
466
RYRSW
471
VPHTF
476
ESELS
481
DPVEL
486
LVAES
491
Mutation Information
DNA mutation:
None
Peptide Range:
266 ~ 290
Mut AA position:
278 (13 in Wild Type peptide)
Alignment
Wild Type:
"LNAVALGDGGHYTCRYRLHDNQNGW
||||||||||||.||||||||||||
Mutant:
LNAVALGDGGHYPCRYRLHDNQNGW"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) A1BG

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay