Immunogenicity 3353
Sample ID
4069
Response
Negative
Tumor Type
Pancreatic cancer
Gene Symbol
CPSF3
Transcript ID
uc002qzp.2
HLA INFO
B*38:01
TCR INFO
No TCR info found!
Full length protein sequence (647 aa)
MLDCG
1
IHPGL
6
EGMDA
11
LPYID
16
LIDPA
21
EIDLL
26
LISHF
31
HLDHC
36
GALPW
41
FLQKT
46
SFKGR
51
TFMTH
56
ATKAI
61
YRWLL
66
SDYVK
71
VSNIS
76
ADDML
81
YTETD
86
LEESM
91
DKIET
96
INFHE
101
VKEVA
106
GIKFW
111
CYHAG
116
HVLGA
121
AMFMI
126
EIAGV
131
KLLYT
136
GDFSR
141
QEDRH
146
LMAAE
151
IPNIK
156
PDILI
161
IESTY
166
GTHIH
171
EKREE
176
REARF
181
CNTVH
186
DIVNR
191
GGRGL
196
IPVFA
201
LGRAQ
206
ELLLI
211
LDEYW
216
QNHPE
221
LHDIP
226
IYYAS
231
SLAKK
236
CMAVY
241
QTYVN
246
AMNDK
251
IRKQI
256
NINNP
261
FVFKH
266
ISNLK
271
SMDHF
276
DDIGP
281
SVVMA
286
SPGMM
291
QSGLS
296
RELFE
301
SWCTD
306
KRNGV
311
IIAGY
316
CVEGT
321
LAKHI
326
MSEPE
331
EITTM
336
SGQKL
341
PLKMS
346
VDYIS
351
FSAHT
356
DYQQT
361
SEFIR
366
ALKPP
371
HVILV
376
HGEQN
381
EMARL
386
KAALI
391
REYED
396
NDEVH
401
IEVHN
406
PRNTE
411
AVTLN
416
FRGEK
421
LAKVM
426
GFLAD
431
KKPEQ
436
GQRVS
441
GILVK
446
RNFNY
451
HILSP
456
CDLSN
461
YTDLA
466
MSTVK
471
QTQAI
476
PYTGP
481
FNLLC
486
YQLQK
491
LTGDV
496
EELEI
501
QEKPA
506
LKVFK
511
NITVI
516
QEPGM
521
VVLEW
526
LANPS
531
NDMYA
536
DTVTT
541
VILEV
546
QSNPK
551
IRKGA
556
VQKVS
561
KKLEM
566
HVYSK
571
RLEIM
576
LQDIF
581
GEDCV
586
SVKDD
591
SILSV
596
TVDGK
601
TANLN
606
LETRT
611
VECEE
616
GSEDD
621
ESLRE
626
MVELA
631
AQRLY
636
EALTP
641
VH
646
Mutation Information
DNA mutation:
None
Peptide Range:
545 ~ 569
Mut AA position:
557 (13 in Wild Type peptide)
Alignment
Wild Type:
"TVILEVQSNPKIRKGAVQKVSKKLE
||||||||||||.||||||||||||
Mutant:
TVILEVQSNPKIKKGAVQKVSKKLE"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) CPSF3
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay