Immunogenicity 3403

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
CARF
Transcript ID
uc002uzn.3
HLA INFO
B*14:02
TCR INFO

No TCR info found!

T cell Tumor cell B*14:02
sequence
Full length protein sequence (207 aa)
MIVAS
1
PTENG
6
QVLRV
11
IPPTQ
16
TGMAQ
21
VIIPQ
26
GQLVD
31
VNSPR
36
DVPEE
41
KPSNR
46
NLPTV
51
RVDTL
56
ADNTS
61
NYILH
66
PQTSF
71
PLPKK
76
SVTGM
81
LEEPL
86
LGPLQ
91
PLSSN
96
TPIWA
101
CRLRS
106
CEKIG
111
DSYRG
116
YCVSE
121
TELES
126
VLTFH
131
KQQTQ
136
SVWGT
141
RQSPS
146
PAKPA
151
TRLMW
156
KSQYV
161
PYDGI
166
PFVNA
171
GTFLK
176
NYFKR
181
FSSSH
186
SPLSK
191
CDFPK
196
VITFL
201
FW
206
Mutation Information
DNA mutation:
None
Peptide Range:
157 ~ 181
Mut AA position:
169 (13 in Wild Type peptide)
Alignment
Wild Type:
"RLMWKSQYVPYDGIPFVNAGTFLKN
||||||||||||.||||||||||||
Mutant:
RLMWKSQYVPYDEIPFVNAGTFLKN"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ALS2CR8

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay