Immunogenicity 3408

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
NBEAL1
Transcript ID
uc002uzq.3
HLA INFO
DQA*02:01 / DQB*02:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*02:01 DQB*02:02
sequence
Full length protein sequence (200 aa)
MASRE
1
RLFEL
6
WMLYC
11
TKKDP
16
DYLKL
21
WLDTF
26
VSSYE
31
QFLDV
36
DFEKL
41
PTRVD
46
DMPPG
51
ISLLP
56
DNILQ
61
VLRIQ
66
LLQCV
71
QKMAD
76
GLEEQ
81
QQALS
86
ILLVK
91
FFIIL
96
CRNLS
101
NVEEI
106
GTCSY
111
INYVI
116
TMTTL
121
YIQQL
126
KSKKK
131
EKEMA
136
DQTCI
141
EEFVI
146
HALAF
151
CESLY
156
DPYRN
161
WRHRI
166
SGSQI
171
PEGFL
176
RHISI
181
RVSSG
186
KNPAT
191
PTPEG
196
Mutation Information
DNA mutation:
None
Peptide Range:
71 ~ 95
Mut AA position:
83 (13 in Wild Type peptide)
Alignment
Wild Type:
"LLQCVQKMADGLEEQQQALSILLVK
||||||||||||.||||||||||||
Mutant:
LLQCVQKMADGLQEQQQALSILLVK"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) NBEAL1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay