Immunogenicity 342

summary
Sample ID
4196
Response
Negative
Tumor Type
Colorectal cancer
Gene Symbol
KRT6A
Transcript ID
uc001sam.3
HLA INFO
A*02:01
TCR INFO

No TCR info found!

T cell Tumor cell A*02:01
sequence
Full length protein sequence (564 aa)
MASTS
1
TTIRS
6
HSSSR
11
RGFSA
16
NSARL
21
PGVSR
26
SGFSS
31
VSVSR
36
SRGSG
41
GLGGA
46
CGGAG
51
FGSRS
56
LYGLG
61
GSKRI
66
SIGGG
71
SCAIS
76
GGYGS
81
RAGGS
86
YGFGG
91
AGSGF
96
GFGGG
101
AGIGF
106
GLGGG
111
AGLAG
116
GFGGP
121
GFPVC
126
PPGGI
131
QEVTV
136
NQSLL
141
TPLNL
146
QIDPT
151
IQRVR
156
AEERE
161
QIKTL
166
NNKFA
171
SFIDK
176
VRFLE
181
QQNKV
186
LETKW
191
TLLQE
196
QGTKT
201
VRQNL
206
EPLFE
211
QYINN
216
LRRQL
221
DSIVG
226
ERGRL
231
DSELR
236
GMQDL
241
VEDFK
246
NKYED
251
EINKR
256
TAAEN
261
EFVTL
266
KKDVD
271
AAYMN
276
KVELQ
281
AKADT
286
LTDEI
291
NFLRA
296
LYDAE
301
LSQMQ
306
THISD
311
TSVVL
316
SMDNN
321
RNLDL
326
DSIIA
331
EVKAQ
336
YEEIA
341
QRSRA
346
EAESW
351
YQTKY
356
EELQV
361
TAGRH
366
GDDLR
371
NTKQE
376
IAEIN
381
RMIQR
386
LRSEI
391
DHVKK
396
QCANL
401
QAAIA
406
DAEQR
411
GEMAL
416
KDAKN
421
KLEGL
426
EDALQ
431
KAKQD
436
LARLL
441
KEYQE
446
LMNVK
451
LALDV
456
EIATY
461
RKLLE
466
GEECR
471
LNGEG
476
VGQVN
481
ISVVQ
486
STVSS
491
GYGGA
496
SGVGS
501
GLGLG
506
GGSSY
511
SYGSG
516
LGVGG
521
GFSSS
526
SGRAI
531
GGGLS
536
SVGGG
541
SSTIK
546
YTTTS
551
SSSRK
556
SYKH
561
Mutation Information
DNA mutation:
c.T709G
Peptide Range:
225 ~ 249
Mut AA position:
237 (13 in Wild Type peptide)
Alignment
Wild Type:
"LDSIVGERGRLDSELRGMQDLVEDF
||||||||||||.||||||||||||
Mutant:
LDSIVGERGRLDAELRGMQDLVEDF"
reference
clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

LDSIVGERGRLDAELRGMQDLVEDF

Antigen Type

TMG

T-cell Source

TILs

APC Type

DSs

Assay

ELISPOT