Immunogenicity 3614

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
H1FOO
Transcript ID
uc003emv.3
HLA INFO
C*07:02
TCR INFO

No TCR info found!

T cell Tumor cell C*07:02
sequence
Full length protein sequence (207 aa)
MAPAT
1
APRRA
6
GEAKG
11
KGPKK
16
PSEAK
21
EDPPN
26
VGKVK
31
KAAKR
36
PAKVQ
41
KPPPK
46
PGAAT
51
EKARK
56
QGGAA
61
KDTRA
66
QSGEA
71
RKVPP
76
KPDKA
81
MRAPS
86
SAGGL
91
SRKAK
96
AKGSR
101
SSQGD
106
AEAYR
111
KTKAE
116
SKSSK
121
PTASK
126
VKNGA
131
ASPTK
136
KKVVA
141
KAKAP
146
KAGQG
151
PNTKA
156
AAPAK
161
GSGSK
166
VVPAH
171
LSRKT
176
EAPKG
181
PRKAG
186
LPIKA
191
SSSKV
196
SSQRA
201
EA
206
Mutation Information
DNA mutation:
None
Peptide Range:
1 ~ 16
Mut AA position:
4 (4 in Wild Type peptide)
Alignment
Wild Type:
"MAPATAPRRAGEAKGKGPKKPSEAK
|||.||||||||||||
Mutant:
MAPVTAPRRAGEAKGK---------"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) H1FOO

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay