Immunogenicity 3633

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
SDHAP2
Transcript ID
uc003fuu.4
HLA INFO
DQA*01:02 / DQB*06:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:02 DQB*06:02
sequence
Full length protein sequence (161 aa)
MPFSR
1
TEDGK
6
IYQRA
11
FGGHS
16
LKFGK
21
GRQAH
26
RCCCV
31
ADRTG
36
HSILH
41
TLYGR
46
SLRYD
51
TSCFV
56
EYFAL
61
DLLME
66
NGECR
71
GVFAL
76
CIQDG
81
SIHRI
86
RAKNT
91
IVATG
96
LRAHL
101
LELHV
106
CPHQH
111
QRRHG
116
HDHQG
121
RPSLP
126
GPRVC
131
SVPPH
136
RHIWC
141
WLSHY
146
GRMSW
151
RGRHS
156
H
161
Mutation Information
DNA mutation:
None
Peptide Range:
15 ~ 39
Mut AA position:
27 (13 in Wild Type peptide)
Alignment
Wild Type:
"AFGGHSLKFGKGRQAHRCCCVADRT
||||||||||||.||||||||||||
Mutant:
AFGGHSLKFGKGGQAHRCCCVADRT"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SDHAP2

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay