Immunogenicity 3725

summary
Sample ID
4069
Response
Negative
Tumor Type
Pancreatic cancer
Gene Symbol
C4orf51
Transcript ID
uc003ikk.3
HLA INFO
C*12:02
TCR INFO

No TCR info found!

T cell Tumor cell C*12:02
sequence
Full length protein sequence (202 aa)
MSHYF
1
YLTPQ
6
ILLPF
11
SPLTS
16
QEFDL
21
IRRKA
26
GASWQ
31
DETRW
36
SDSSV
41
TTYTG
46
SYRKK
51
QLDKS
56
MCSQF
61
SFRAG
66
QHEPE
71
CKQMS
76
LTNSS
81
ACHLL
86
CWAGT
91
QETTD
96
IKGLF
101
PDITR
106
PFKKS
111
FDVKH
116
GVAHQ
121
IWDFG
126
DCFPT
131
PPNYG
136
KYCVR
141
PKKPA
146
QEALI
151
NYSRR
156
GKGVL
161
KHLHG
166
RCDSE
171
SKVCS
176
SEDSE
181
ADRYS
186
DYGWG
191
GPSSP
196
FN
201
Mutation Information
DNA mutation:
None
Peptide Range:
161 ~ 185
Mut AA position:
173 (13 in Wild Type peptide)
Alignment
Wild Type:
"GKGVLKHLHGRCDSESKVCSSEDSE
||||||||||||.||||||||||||
Mutant:
GKGVLKHLHGRCNSESKVCSSEDSE"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) C4orf51

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay