Immunogenicity 3742

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
TUBB7P
Transcript ID
uc011clg.2
HLA INFO
DQA*01:02 / DQB*06:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:02 DQB*06:02
sequence
Full length protein sequence (362 aa)
MDSVR
1
SGPFG
6
QVFRP
11
DNFIS
16
RQCGA
21
GNNWA
26
KGRYT
31
EGAEL
36
TESVM
41
DVVRK
46
EAESC
51
DCLQG
56
FQLTH
61
SLGGG
66
TGSGM
71
GTLLI
76
SKIWE
81
EYPDR
86
IINTL
91
SILLL
96
PKVSD
101
TVVEP
106
YNATL
111
SVHQL
116
IENAD
121
ETFCI
126
DNEAL
131
YDICS
136
RTLKL
141
PTPTY
146
GDLNH
151
LVSAT
156
MSGVT
161
TCLCF
166
PDQLN
171
ADLRK
176
LAMNM
181
VPFPR
186
LHFFM
191
PGFAP
196
LTSRG
201
SQQYR
206
ALTVA
211
ELTQQ
216
MFDAK
221
NMMAA
226
RDPRH
231
GRYLT
236
AAAIF
241
QGRMP
246
MREVD
251
EQMFN
256
IQDKN
261
SSYFA
266
DWFPN
271
NVKTA
276
VCDIP
281
PWGLK
286
MSVTF
291
TGNNT
296
AVQEL
301
KRVSE
306
QFTAT
311
FRRKA
316
FLHWY
321
TGEGM
326
DEMEF
331
TEAES
336
NMNDL
341
VSEYQ
346
QYQDA
351
TAEGG
356
GV
361
Mutation Information
DNA mutation:
None
Peptide Range:
29 ~ 53
Mut AA position:
41 (13 in Wild Type peptide)
Alignment
Wild Type:
"WAKGRYTEGAELTESVMDVVRKEAE
||||||||||||.||||||||||||
Mutant:
WAKGRYTEGAELMESVMDVVRKEAE"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) TUBB4Q

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay