Immunogenicity 3783

summary
Sample ID
3978
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
JADE2
Transcript ID
uc003kzp.3
HLA INFO
DQA*03:01 / DQB*03:02
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*03:01 DQB*03:02
sequence
Full length protein sequence (286 aa)
MEPIT
1
KISHI
6
PASRW
11
ALSCS
16
LCKEC
21
TGTCI
26
QCSMP
31
SCVTA
36
FHVTC
41
AFDHG
46
LEMRT
51
ILADN
56
DEVKF
61
KSFCQ
66
EHSDG
71
GPRNE
76
PTSEP
81
TEPSQ
86
AGEDL
91
EKVTL
96
RKQRL
101
QQLEE
106
DFYEL
111
VEPAE
116
VAERL
121
DLAEA
126
LVDFI
131
YQYWK
136
LKRKA
141
NANQP
146
LLTPK
151
TDEVD
156
NLAQQ
161
EQDVL
166
YRRLK
171
LFTHL
176
RQDLE
181
RVRNL
186
CYMVT
191
RRERT
196
KHAIC
201
KLQEQ
206
IFHLQ
211
MKLIE
216
QDLCR
221
GRRLP
226
HLPPP
231
PPCAL
236
SCGAG
241
SQGGC
246
VFGSW
251
WGYVR
256
GAKGH
261
WPPLL
266
PFTIQ
271
LVGPD
276
GGLQG
281
S
286
Mutation Information
DNA mutation:
None
Peptide Range:
176 ~ 200
Mut AA position:
188 (13 in Wild Type peptide)
Alignment
Wild Type:
"LFTHLRQDLERVRNLCYMVTRRERT
||||||||||||.||||||||||||
Mutant:
LFTHLRQDLERVTNLCYMVTRRERT"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) PHF15

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay