Immunogenicity 3794

summary
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
ABLIM3
Transcript ID
uc003lqe.1
HLA INFO
C*01:02
TCR INFO

No TCR info found!

T cell Tumor cell C*01:02
sequence
Full length protein sequence (572 aa)
MNTSI
1
PYQQN
6
PYNPR
11
GSSNV
16
IQCYR
21
CGDTC
26
KGEVV
31
RVHNN
36
HFHIR
41
CFTCQ
46
VCGCG
51
LAQSG
56
FFFKN
61
QEYIC
66
TQDYQ
71
QLYGT
76
RCDSC
81
RDFIT
86
GEVIS
91
ALGRT
96
YHPKC
101
FVCSL
106
CRKPF
111
PIGDK
116
VTFSG
121
KECVC
126
QTCSQ
131
SMASS
136
KPIKI
141
RGPSH
146
CAGCK
151
EEIKH
156
GQSLL
161
ALDKQ
166
WHVSC
171
FKCQT
176
CSVIL
181
TGEYI
186
SKDGV
191
PYCES
196
DYHAQ
201
FGIKC
206
ETCDR
211
YISGR
216
VLEAG
221
GKHYH
226
PTCAR
231
CVRCH
236
QMFTE
241
GEEMY
246
LTGSE
251
VWHPI
256
CKQAA
261
RAEKK
266
LKHRR
271
TSETS
276
ISPPG
281
SSIGS
286
PNRVI
291
CDIYE
296
NLDLR
301
QRRAS
306
SPGYI
311
DSPTY
316
SRQGM
321
SPTFS
326
RSPHH
331
YYRSG
336
DLSTA
341
TKSKT
346
SEDIS
351
QTSKY
356
SPIYS
361
PDPYY
366
ASESE
371
YWTYH
376
GSPKV
381
PRARR
386
FSSGG
391
EEDDF
396
DRSMH
401
KLQSG
406
IGRLI
411
LKEEM
416
KARSS
421
SYADP
426
WTPPR
431
SSTSS
436
REALH
441
TAGYE
446
MSLNG
451
SPRSH
456
YLADS
461
DPLIS
466
KSASL
471
PAYRR
476
NGLHR
481
TPSAD
486
LFHYD
491
SMNAV
496
NWGMR
501
EYKIY
506
PYELL
511
LVTTR
516
GRNRL
521
PKDVD
526
RTRLE
531
RHLSQ
536
EEFYQ
541
VFGMT
546
ISEFD
551
RLALW
556
KRNEL
561
KKQAR
566
LF
571
Mutation Information
DNA mutation:
None
Peptide Range:
544 ~ 568
Mut AA position:
556 (13 in Wild Type peptide)
Alignment
Wild Type:
"YQVFGMTISEFDRLALWKRNELKKQ
||||||||||||.||||||||||||
Mutant:
YQVFGMTISEFDWLALWKRNELKKQ"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ABLIM3

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay