Immunogenicity 3824

summary
Sample ID
4069
Response
Negative
Tumor Type
Pancreatic cancer
Gene Symbol
FAM8A1
Transcript ID
uc003ncc.3
HLA INFO
B*38:01
TCR INFO

No TCR info found!

T cell Tumor cell B*38:01
sequence
Full length protein sequence (413 aa)
MAEGP
1
EEARG
6
HPPGQ
11
DDGGG
16
DHEPV
21
PSLRG
26
PPTTA
31
VPCPR
36
DDPQA
41
EPQAP
46
GRPTA
51
PGLAA
56
AAAAD
61
KLEPP
66
RELRK
71
RGEAA
76
SGSGA
81
ELQEQ
86
AGCEA
91
PEAAA
96
PRERP
101
ARLSA
106
REYSR
111
QVHEW
116
LWQSY
121
CGYLT
126
WHSGL
131
AAFPA
136
YCSPQ
141
PSPQS
146
FPSGG
151
AAVPQ
156
AAAPP
161
PPQLG
166
YYNPF
171
YFLSP
176
GAAGP
181
DPRTA
186
AGIST
191
PAPVA
196
GLGPR
201
APHVQ
206
ASVRA
211
TPVTR
216
VGSAA
221
PSRSP
226
SETGR
231
QAGRE
236
YVIPS
241
LAHRF
246
MAEMV
251
DFFIL
256
FFIKA
261
TIVLS
266
IMHLS
271
GIKDI
276
SKFAM
281
HYIIE
286
EIDED
291
TSMED
296
LQKMM
301
VVALI
306
YRLLV
311
CFYEI
316
ICIWG
321
AGGAT
326
PGKFL
331
LGLRV
336
VTCDT
341
SVLIA
346
PSRVL
351
VIPSS
356
NVSIT
361
TSTIR
366
ALIKN
371
FSIAS
376
FFPAF
381
ITLLF
386
FQHNR
391
TAYDI
396
VAGTI
401
VVKRN
406
GVR
411
Mutation Information
DNA mutation:
None
Peptide Range:
143 ~ 167
Mut AA position:
155 (13 in Wild Type peptide)
Alignment
Wild Type:
"SPQPSPQSFPSGGAAVPQAAAPPPP
||||||||||||.||||||||||||
Mutant:
SPQPSPQSFPSGSAAVPQAAAPPPP"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) FAM8A1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay