Immunogenicity 3864

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
SLC22A16
Transcript ID
uc003pue.3
HLA INFO
DRB*15:01
TCR INFO

No TCR info found!

T cell Tumor cell DRB*15:01
sequence
Full length protein sequence (558 aa)
MFTGT
1
LQRRS
6
SENVY
11
MRTLH
16
AVSHP
21
YSNSM
26
RFQRV
31
LYFIC
36
AFQNI
41
SCGIH
46
YLASV
51
FMGVT
56
PHHVC
61
RPPGN
66
LQNGE
71
IWELS
76
RCSRN
81
KRENT
86
SSLGY
91
EYTGS
96
KKEFP
101
CVDGY
106
IYDQN
111
TWKST
116
AVTQW
121
NLVCD
126
RKWLA
131
MLIQP
136
LFMFG
141
VLLGS
146
VTFGY
151
FSDRL
156
GRRVV
161
LWATS
166
SSMFL
171
FGIAA
176
AFAVD
181
YYTFM
186
AARFF
191
LAMVA
196
SGYLV
201
VGFVY
206
VMEFI
211
GMKSR
216
TWASV
221
HLHSF
226
FAVGT
231
LLVAL
236
TGYLV
241
RTWWL
246
YQMIL
251
STVTV
256
PFILC
261
CWVLP
266
ETPFW
271
LLSEG
276
RYEEA
281
QKIVD
286
IMAKW
291
NRASS
296
CKLSE
301
LLSLD
306
LQGPV
311
SNSPT
316
EVQKH
321
NLSYL
326
FYNWS
331
ITKRT
336
LTVWL
341
IWFTG
346
SLGFY
351
SFSLN
356
SVNLG
361
GNEYL
366
NLFLL
371
GVVEI
376
PAYTF
381
VCIAM
386
DKVGR
391
RTVLA
396
YSLFC
401
SALAC
406
GVVMV
411
IPQKH
416
YILGV
421
VTAMV
426
GKFAI
431
GAAFG
436
LIYLY
441
TAELY
446
PTIVR
451
SLAVG
456
SGSMV
461
CRLAS
466
ILAPF
471
SVDLS
476
SIWIF
481
IPQLF
486
VGTMA
491
LLSGV
496
LTLKL
501
PETLG
506
KRLAT
511
TWEEA
516
AKLES
521
ENESK
526
SSKLL
531
LTTNN
536
SGLEK
541
TEAIT
546
PRDSG
551
LGE
556
Mutation Information
DNA mutation:
None
Peptide Range:
1 ~ 20
Mut AA position:
8 (8 in Wild Type peptide)
Alignment
Wild Type:
"MFTGTLQRRSSENVYMRTLHAVSHP
|||||||.||||||||||||
Mutant:
MFTGTLQSRSSENVYMRTLH-----"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) SLC22A16

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay