Immunogenicity 3891
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
LINC00602
Transcript ID
uc011egm.2
HLA INFO
C*05:01
TCR INFO
No TCR info found!
Full length protein sequence (96 aa)
MENCA
1
KQVAK
6
KARWP
11
SSGPV
16
HHARA
21
LRSAG
26
RFQRL
31
GALWG
36
ARRSS
41
RKRRV
46
CGVPP
51
SLLSI
56
WGSRG
61
KLHPA
66
PWAPM
71
KTSPS
76
QLKLP
81
AAATS
86
DSDLS
91
L
96
Mutation Information
DNA mutation:
None
Peptide Range:
53 ~ 77
Mut AA position:
65 (13 in Wild Type peptide)
Alignment
Wild Type:
"VPPSLLSIWGSRGKLHPAPWAPMKT
||||||||||||.||||||||||||
Mutant:
VPPSLLSIWGSRVKLHPAPWAPMKT"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) LINC00602
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay