Immunogenicity 3931

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
CLK2P1
Transcript ID
uc003swk.2
HLA INFO
B*40:01
TCR INFO

No TCR info found!

T cell Tumor cell B*40:01
sequence
Full length protein sequence (271 aa)
MFDWF
1
DYHGH
6
MCISL
11
ELLGL
16
STFDF
21
LKDNN
26
HLPYP
31
IHQVH
36
HMASQ
41
LCQAV
46
KFLHD
51
NKLTH
56
TDLKP
61
ENILF
66
VNSDY
71
ELTYN
76
LEKKR
81
HERSV
86
KSTAV
91
RVGDF
96
GSATF
101
DHEHH
106
STIVS
111
TRHYR
116
APEVI
121
LELGW
126
SQPCD
131
VWSIG
136
CIIFE
141
YYVGF
146
TLFQT
151
HDNRQ
156
HLATM
161
ERILG
166
PIPSR
171
MIRKT
176
RKQKY
181
FYRGR
186
LDWDE
191
NTSAG
196
RYVRE
201
NCKPL
206
RQYLT
211
SEAEE
216
DHQLF
221
DLIES
226
MLEYE
231
PAQRL
236
TLGEA
241
LQHPF
246
FSRLW
251
AEPPN
256
KLWDS
261
SQDIS
266
P
271
Mutation Information
DNA mutation:
None
Peptide Range:
178 ~ 202
Mut AA position:
190 (13 in Wild Type peptide)
Alignment
Wild Type:
"RKTRKQKYFYRGRLDWDENTSAGRY
||||||||||||.||||||||||||
Mutant:
RKTRKQKYFYRGHLDWDENTSAGRY"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CLK2P

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay