Immunogenicity 3937

summary
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
FAM183BP
Transcript ID
uc011kbd.2
HLA INFO
A*03:01
TCR INFO

No TCR info found!

T cell Tumor cell A*03:01
sequence
Full length protein sequence (242 aa)
MSPLP
1
STLPQ
6
GTSCP
11
ALPLL
16
LPGRP
21
CAAAL
26
FVRHP
31
FPGVP
36
LSFPL
41
TLLIA
46
LLSSP
51
LYSSP
56
HSLSS
61
HPQPD
66
LTACK
71
SHPGE
76
MVSLL
81
LGQFP
86
GGPEL
91
PGLVD
96
SQQRP
101
GRHGE
106
SKTMA
111
SEHSA
116
WPAPF
121
LSCLG
126
SQTAQ
131
ASAFE
136
LASPW
141
NLVCN
146
HGANC
151
RTRGR
156
EVDGE
161
PFSWQ
166
YPEAV
171
LVKRL
176
DSERP
181
ERYHT
186
NAVAW
191
RRSGV
196
PLPRD
201
CRRPA
206
AKRVV
211
RGRRE
216
SPGPT
221
EQPQG
226
YGGTP
231
EREGG
236
HR
241
Mutation Information
DNA mutation:
None
Peptide Range:
80 ~ 104
Mut AA position:
92 (13 in Wild Type peptide)
Alignment
Wild Type:
"EMVSLLLGQFPGGPELPGLVDSQQR
||||||||||||.||||||||||||
Mutant:
EMVSLLLGQFPGSPELPGLVDSQQR"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) FAM183B

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay