Immunogenicity 3949

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
LOC646999
Transcript ID
uc011kbe.1
HLA INFO
A*25:01
TCR INFO

No TCR info found!

T cell Tumor cell A*25:01
sequence
Full length protein sequence (135 aa)
MGKVV
1
GTVIT
6
EPNLC
11
LSNCL
16
SKQEL
21
NGLEP
26
TGLES
31
PAEES
36
GGWDA
41
TTAAS
46
PPGPR
51
PHGER
56
GDTEA
61
AHGAR
66
GDAAE
71
PGSPK
76
RPRHS
81
PLPRP
86
APGPR
91
PWDAE
96
PPPAF
101
QTQTP
106
PRPCS
111
SLPRL
116
AARGT
121
FQLRN
126
TFFNI
131
Mutation Information
DNA mutation:
None
Peptide Range:
97 ~ 121
Mut AA position:
109 (13 in Wild Type peptide)
Alignment
Wild Type:
"WDAEPPPAFQTQTPPRPCSSLPRLA
||||||||||||.||||||||||||
Mutant:
WDAEPPPAFQTQPPPRPCSSLPRLA"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) LOC646999

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay