Immunogenicity 4092

summary
Sample ID
3971
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
CBWD3
Transcript ID
uc004agl.4
HLA INFO
DQA*01:03 / DQB*02:05
TCR INFO

No TCR info found!

T cell Tumor cell { DQA*01:03 DQB*02:05
sequence
Full length protein sequence (199 aa)
MFWVD
1
AELGS
6
DIYLD
11
GIITI
16
VDSKY
21
GLKHL
26
TEEKP
31
DGLIN
36
EATRS
41
INGLG
46
QILET
51
QRSSL
56
QKKLQ
61
HVPGT
66
QPHLD
71
QSIVT
76
ITFEV
81
PGNAK
86
EEHLN
91
MFIQN
96
LLWEK
101
NVRNK
106
DNHCM
111
EVIRL
116
KGLVS
121
IKDKS
126
QQVIV
131
QGVHE
136
LYDLE
141
ETPVS
146
WKDDT
151
ERTNR
156
LVLIG
161
RNLDK
166
DILKQ
171
LFIAT
176
VTETE
181
KQWTT
186
HFKED
191
QVCT
196
Mutation Information
DNA mutation:
None
Peptide Range:
72 ~ 96
Mut AA position:
84 (13 in Wild Type peptide)
Alignment
Wild Type:
"PHLDQSIVTITFEVPGNAKEEHLNM
||||||||||||.||||||||||||
Mutant:
PHLDQSIVTITFDVPGNAKEEHLNM"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CBWD3

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay