Immunogenicity 4105

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
CEP78
Transcript ID
uc011lsp.1
HLA INFO
C*07:02
TCR INFO

No TCR info found!

T cell Tumor cell C*07:02
sequence
Full length protein sequence (283 aa)
MNKFC
1
RSRVP
6
AIRYK
11
DVTFQ
16
LCKAL
21
KGCLS
26
ISSVL
31
KNLEL
36
NGLIL
41
RERDL
46
TILAK
51
GLNKS
56
ASLVH
61
LSLAN
66
CPIGD
71
GGLEI
76
ICQGI
81
KSSIT
86
LKTVN
91
FTGCN
96
LTWQG
101
ADHMA
106
KILKY
111
QTMRR
116
HEETW
121
AESLR
126
YRRPD
131
LDCMA
136
GLRRI
141
TLNCN
146
TLIGD
151
LGACA
156
FADSL
161
SEDLW
166
LRALD
171
LQQCG
176
LTNEG
181
AKALL
186
EALET
191
NTTLV
196
VLDIR
201
KNPLI
206
DHSMM
211
KAVIK
216
KVLQN
221
GRSAK
226
SEYQW
231
ITSPS
236
VKEPS
241
KTAKQ
246
KRRTI
251
ILGSG
256
HKGKA
261
TIRIG
266
NLFCL
271
GFLML
276
LVF
281
Mutation Information
DNA mutation:
None
Peptide Range:
1 ~ 19
Mut AA position:
7 (7 in Wild Type peptide)
Alignment
Wild Type:
"MNKFCRSRVPAIRYKDVTFQLCKAL
||||||.||||||||||||
Mutant:
MNKFCRRRVPAIRYKDVTF------"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CEP78

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay