Immunogenicity 4339

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
OR5M10
Transcript ID
NM_001004741
HLA INFO
A*25:01
TCR INFO

No TCR info found!

T cell Tumor cell A*25:01
sequence
Full length protein sequence (315 aa)
MLSPN
1
HTIVT
6
EFILL
11
GLTDD
16
PVLEK
21
ILFGV
26
FLAIY
31
LITLA
36
GNLCM
41
ILLIR
46
TNSQL
51
QTPMY
56
FFLGH
61
LSFVD
66
ICYSS
71
NVTPN
76
MLHNF
81
LSEQK
86
TISYA
91
GCFTQ
96
CLLFI
101
ALVIT
106
EFYFL
111
ASMAL
116
DRYVA
121
ICSPL
126
HYSSR
131
MSKNI
136
CISLV
141
TVPYM
146
YGFLN
151
GLSQT
156
LLTFH
161
LSFCG
166
SLEIN
171
HFYCA
176
DPPLI
181
MLACS
186
DTRVK
191
KMAMF
196
VVAGF
201
TLSSS
206
LFIIL
211
LSYLF
216
IFAAI
221
FRIRS
226
AEGRH
231
KAFST
236
CASHL
241
TIVTL
246
FYGTL
251
FCMYV
256
RPPSE
261
KSVEE
266
SKIIA
271
VFYTF
276
LSPML
281
NPLIY
286
SLRNR
291
DVILA
296
IQQMI
301
RGKSF
306
CKIAV
311
Mutation Information
DNA mutation:
None
Peptide Range:
28 ~ 52
Mut AA position:
40 (13 in Wild Type peptide)
Alignment
Wild Type:
"FGVFLAIYLITLAGNLCMILLIRTN
||||||||||||.||||||||||||
Mutant:
FGVFLAIYLITLVGNLCMILLIRTN"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) OR5M10

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay