Immunogenicity 4365

summary
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
OR13C5
Transcript ID
NM_001004482
HLA INFO
C*07:02
TCR INFO

No TCR info found!

T cell Tumor cell C*07:02
sequence
Full length protein sequence (318 aa)
MEWEN
1
HTILV
6
EFFLK
11
GLSGH
16
PRLEL
21
LFFVL
26
IFIMY
31
VVILL
36
GNGTL
41
ILISI
46
LDPHL
51
HTPMY
56
FFLGN
61
LSFLD
66
ICYTT
71
TSIPS
76
TLVSF
81
LSERK
86
TISLS
91
GCAVQ
96
MFLSL
101
AMGTT
106
ECVLL
111
GVMAF
116
DRYVA
121
ICNPL
126
RYPII
131
MSKDA
136
YVPMA
141
AGSWI
146
IGAVN
151
SAVQT
156
VFVVQ
161
LPFCR
166
NNIIN
171
HFTCE
176
ILAVM
181
KLACA
186
DISGN
191
EFILL
196
VTTTL
201
FLLTP
206
LLLII
211
VSYTL
216
IILSI
221
FKISS
226
SEGRS
231
KPSST
236
CSARL
241
TVVIT
246
FCGTI
251
FLMYM
256
KPKSQ
261
ETLNS
266
DDLDA
271
TDKLI
276
FIFYR
281
VMTPM
286
MNPLI
291
YSLRN
296
KDVKE
301
AVKHL
306
LRRKN
311
FNK
316
Mutation Information
DNA mutation:
None
Peptide Range:
219 ~ 243
Mut AA position:
231 (13 in Wild Type peptide)
Alignment
Wild Type:
"TLIILSIFKISSSEGRSKPSSTCSA
||||||||||||.||||||||||||
Mutant:
TLIILSIFKISSLEGRSKPSSTCSA"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) OR13C5

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay