Immunogenicity 4368

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
OR5M9
Transcript ID
NM_001004743
HLA INFO
A*02:01
TCR INFO

No TCR info found!

T cell Tumor cell A*02:01
sequence
Full length protein sequence (310 aa)
MPNFT
1
DVTEF
6
TLLGL
11
TCRQE
16
LQVLF
21
FVVFL
26
AVYMI
31
TLLGN
36
IGMII
41
LISIS
46
PQLQS
51
PMYFF
56
LSHLS
61
FADVC
66
FSSNV
71
TPKML
76
ENLLS
81
ETKTI
86
SYVGC
91
LVQCY
96
FFIAV
101
VHVEV
106
YILAV
111
MAFDR
116
YMAGC
121
NPLLY
126
GSKMS
131
RTVCV
136
RLISV
141
PYVYG
146
FSVSL
151
ICTLW
156
TYGLY
161
FCGNF
166
EINHF
171
YCADP
176
PLIQI
181
ACGRV
186
HIKEI
191
TMIVI
196
AGINF
201
TYSLS
206
VVLIS
211
YTLIV
216
VAVLR
221
MRSAD
226
GRRKA
231
FSTCG
236
SHLTA
241
VSMFY
246
GTPIF
251
MYLRR
256
PTEES
261
VEQGK
266
MVAVF
271
YTTVI
276
PMLNP
281
MIYSL
286
RNKDV
291
KEAVN
296
KAITK
301
TYVRQ
306
Mutation Information
DNA mutation:
None
Peptide Range:
62 ~ 86
Mut AA position:
74 (13 in Wild Type peptide)
Alignment
Wild Type:
"SHLSFADVCFSSNVTPKMLENLLSE
||||||||||||.||||||||||||
Mutant:
SHLSFADVCFSSTVTPKMLENLLSE"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) OR5M9

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay