Immunogenicity 4406

summary
Sample ID
3942
Response
Negative
Tumor Type
Rectal cancer
Gene Symbol
OR13F1
Transcript ID
NM_001004485
HLA INFO
C*16:01
TCR INFO

No TCR info found!

T cell Tumor cell C*16:01
sequence
Full length protein sequence (319 aa)
MFPAN
1
WTSVK
6
VFFFL
11
GFFHY
16
PKVQV
21
IIFAV
26
CLLMY
31
LITLL
36
GNIFL
41
ISITI
46
LDSHL
51
HTPMY
56
LFLSN
61
LSFLD
66
IWYSS
71
SALSP
76
MLANF
81
VSGRN
86
TISFS
91
GCATQ
96
MYLSL
101
AMGST
106
ECVLL
111
PMMAY
116
DRYVA
121
ICNPL
126
RYPVI
131
MNRRT
136
CVQIA
141
AGSWM
146
TGCLT
151
AMVEM
156
MSVLP
161
LSLCG
166
NSIIN
171
HFTCE
176
ILAIL
181
KLVCV
186
DTSLV
191
QLIML
196
VISVL
201
LLPMP
206
MLLIC
211
ISYAF
216
ILASI
221
LRISS
226
VEGRS
231
KAFST
236
CTAHL
241
MVVVL
246
FYGTA
251
LSMHL
256
KPSAV
261
DSQEI
266
DKFMA
271
LVYAG
276
QTPML
281
NPIIY
286
SLRNK
291
EVKVA
296
LKKLL
301
IRNHF
306
NTAFI
311
SILK
316
Mutation Information
DNA mutation:
None
Peptide Range:
175 ~ 199
Mut AA position:
187 (13 in Wild Type peptide)
Alignment
Wild Type:
"NHFTCEILAILKLVCVDTSLVQLIM
||||||||||||.||||||||||||
Mutant:
NHFTCEILAILKSVCVDTSLVQLIM"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) OR13F1

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay