Immunogenicity 4551

summary
Sample ID
3995
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
CTDSPL
Transcript ID
NM_005808
HLA INFO
C*05:01
TCR INFO

No TCR info found!

T cell Tumor cell C*05:01
sequence
Full length protein sequence (265 aa)
MDGPA
1
IITQV
6
TNPKE
11
DEGRL
16
PGAGE
21
KASQC
26
NVSLK
31
KQRSR
36
SILSS
41
FFCCF
46
RDYNV
51
EAPPP
56
SSPSV
61
LPPLV
66
EENGG
71
LQKPP
76
AKYLL
81
PEVTV
86
LDYGK
91
KCVVI
96
DLDET
101
LVHSS
106
FKPIS
111
NADFI
116
VPVEI
121
DGTIH
126
QVYVL
131
KRPHV
136
DEFLQ
141
RMGQL
146
FECVL
151
FTASL
156
AKYAD
161
PVADL
166
LDRWG
171
VFRAR
176
LFRES
181
CVFHR
186
GNYVK
191
DLSRL
196
GRELS
201
KVIIV
206
DNSPA
211
SYIFH
216
PENAV
221
PVQSW
226
FDDMT
231
DTELL
236
DLIPF
241
FEGLS
246
REDDV
251
YSMLH
256
RLCNR
261
Mutation Information
DNA mutation:
None
Peptide Range:
2 ~ 26
Mut AA position:
14 (13 in Wild Type peptide)
Alignment
Wild Type:
"DGPAIITQVTNPKEDEGRLPGAGEK
||||||||||||.||||||||||||
Mutant:
DGPAIITQVTNPEEDEGRLPGAGEK"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) CTDSPL

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay