Immunogenicity 4718
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
AGBL3
Transcript ID
NM_178563
HLA INFO
B*13:02
TCR INFO
No TCR info found!
Full length protein sequence (920 aa)
MSEDS
1
EKEDY
6
SDRTI
11
SDEDE
16
SDEDM
21
FMKFV
26
SEDLH
31
RCALL
36
TADSF
41
GDPFF
46
PRTTQ
51
ILLEY
56
QLGRW
61
VPRLR
66
EPRDL
71
YGVSS
76
SGPLS
81
PTRWP
86
YHCEV
91
IDEKV
96
QHIDW
101
TPSCP
106
EPVYI
111
PTGLE
116
TEPLY
121
PDSKE
126
ATVVY
131
LAEDA
136
YKEPC
141
FVYSR
146
VGGNR
151
TPLKQ
156
PVDYR
161
DNTLM
166
FEARF
171
ESGNL
176
QKVVK
181
VAEYE
186
YQLTV
191
RPDLF
196
TNKHT
201
QWYYF
206
QVTNM
211
RAGIV
216
YRFTI
221
VNFTK
226
PASLY
231
SRGMR
236
PLFYS
241
EKEAK
246
AHHIG
251
WQRIG
256
DQIKY
261
YRNNP
266
GQDGR
271
HYFSL
276
TWTFQ
281
FPHNK
286
DTCYF
291
AHCYP
296
YTYTN
301
LQEYL
306
SGINN
311
DPVRS
316
KFCKI
321
RVLCH
326
TLARN
331
MVYIL
336
TITTP
341
LKNSD
346
SRKRK
351
AVILT
356
ARVHP
361
GETNS
366
SWIMK
371
GFLDY
376
ILGNS
381
SDAQL
386
LRDTF
391
VFKVV
396
PMLNP
401
DGVIV
406
GNYRC
411
SLAGR
416
DLNRN
421
YTSLL
426
KESFP
431
SVWYT
436
RNMVH
441
RLMEK
446
REVIL
451
YCDLH
456
GHSRK
461
ENIFM
466
YGCDG
471
SDRSK
476
TLYLQ
481
QRIFP
486
LMLSK
491
NCPDK
496
FSFSA
501
CKFNV
506
QKSKE
511
GTGRV
516
VMWKM
521
GIRNS
526
FTMEA
531
TFCGS
536
TLGNK
541
RGTHF
546
STKDL
551
ESMGY
556
HFCDS
561
LLDYC
566
DPDRT
571
KYYRC
576
LKELE
581
EMERH
586
ITLEK
591
VFEDS
596
DTPVI
601
DITLD
606
VESSS
611
RGSDS
616
SESID
621
SLTYL
626
LKLTS
631
QKKHL
636
KTKKE
641
RNSTI
646
ASHQN
651
ARGQE
656
VYDRG
661
HLLQR
666
HTQSN
671
SDVKD
676
TRPNE
681
PDDYM
686
VDYFR
691
RQLPN
696
QGLDL
701
HHNLK
706
SKIKE
711
CISFQ
716
SKKTG
721
INWTD
726
DEKRS
731
YKDKG
736
IVQTQ
741
EILQY
746
LLPIV
751
HSTKN
756
MQTTQ
761
IKQLF
766
NPRTN
771
FQIQH
776
QLNPA
781
TCRNI
786
KKYST
791
SWTAP
796
RNHPF
801
VIQGD
806
VMANS
811
SEWVQ
816
SKPHR
821
SLESL
826
SPLKG
831
PKKNK
836
HSQIW
841
AIKNE
846
DIKPL
851
SSKWE
856
TASSS
861
FGMDA
866
NVLKY
871
KSLQA
876
EETNQ
881
QSSKH
886
TALHL
891
TKNKD
896
EQANK
901
NDGQP
906
TLYLK
911
FQRES
916
Mutation Information
DNA mutation:
None
Peptide Range:
540 ~ 564
Mut AA position:
552 (13 in Wild Type peptide)
Alignment
Wild Type:
"STLGNKRGTHFSTKDLESMGYHFCD
||||||||||||.||||||||||||
Mutant:
STLGNKRGTHFSMKDLESMGYHFCD"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) AGBL3
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay