Immunogenicity 4729
Sample ID
4007
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
POTEC
Transcript ID
NM_001137671
HLA INFO
DRB*15:01
TCR INFO
No TCR info found!
Full length protein sequence (542 aa)
MVTEV
1
CSMPA
6
ASAVK
11
KPFDL
16
RSKMG
21
KWFHH
26
RFPCC
31
KGSGK
36
SNMGT
41
SGDHD
46
DSFMK
51
MLRSK
56
MGKCC
61
HHCFP
66
CCRGS
71
GTSNV
76
GTSGD
81
HDNSF
86
MKTLR
91
SKMGK
96
WCCHC
101
FPCCR
106
GSGKS
111
NVGAW
116
GDYDD
121
SAFME
126
PRYHV
131
RREDL
136
DKLHR
141
AAWWG
146
KVPRK
151
DLIVM
156
LRDTD
161
MNKRD
166
KQKRT
171
ALHLA
176
SANGN
181
SEVVQ
186
LLLDR
191
RCQLN
196
VLDNK
201
KRTAL
206
IKAVQ
211
CQEDE
216
CVLML
221
LEHGA
226
DQNIP
231
DEYGN
236
TTLHY
241
AVHNE
246
DKLMA
251
KALLL
256
YGADI
261
ESKNK
266
CGLTP
271
LLLGV
276
HEQKQ
281
QVVKF
286
LIKKK
291
ANLNA
296
LDRYG
301
RTALI
306
LAVCC
311
GSASI
316
VNLLL
321
EQNVD
326
VSSQD
331
LSGQT
336
AREYA
341
VSSHH
346
HVICE
351
LLSDY
356
KEKQM
361
LKISS
366
ENSNP
371
EQDLK
376
LTSEE
381
ESQRL
386
KVSEN
391
SQPEK
396
MSQEP
401
EINKD
406
CDREV
411
EEEIK
416
KHGSN
421
PVGLP
426
ENLTN
431
GASAG
436
NGDDG
441
LIPQR
446
RSRKP
451
ENQQF
456
PDTEN
461
EEYHS
466
DEQND
471
TRKQL
476
SEEQN
481
TGISQ
486
DEILT
491
NKQKQ
496
IEVAE
501
KKMNS
506
ELSLS
511
HKKEE
516
DLLRE
521
NSMLQ
526
EEIAM
531
LISGD
536
WN
541
Mutation Information
DNA mutation:
None
Peptide Range:
24 ~ 48
Mut AA position:
36 (13 in Wild Type peptide)
Alignment
Wild Type:
"MGKWFHHRFPCCKGSGKSNMGTSGD
||||||||||||.||||||||||||
Mutant:
MGKWFHHRFPCCRGSGKSNMGTSGD"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) POTEC
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay