Immunogenicity 4737

summary
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
C1orf68
Transcript ID
NM_001024679
HLA INFO
A*02:01
TCR INFO

No TCR info found!

T cell Tumor cell A*02:01
sequence
Full length protein sequence (250 aa)
MCDQQ
1
KQPQF
6
PPSCV
11
KGSGL
16
GAGQG
21
SNGAS
26
VKCPV
31
PCQTQ
36
TVCVT
41
GPAPC
46
PTQTY
51
VKYQV
56
PCQTQ
61
TYVKC
66
PAPCQ
71
RTYVK
76
YPTPC
81
QTYVK
86
CPAPC
91
QTTYV
96
KCPTP
101
CQTYV
106
KCPAP
111
CQMTY
116
IKSPA
121
PCQTQ
126
TCYVQ
131
GASPC
136
QSYYV
141
QAPAS
146
GSTSQ
151
YCVTD
156
PCSAP
161
CSTSY
166
CCLAP
171
RTFGV
176
SPLRR
181
WIQRP
186
QNCNT
191
GSSGC
196
CENSG
201
SSGCC
206
GSGGC
211
GCSCG
216
CGSSG
221
CCCLG
226
IIPMR
231
SRGPA
236
CCDHE
241
DDCCC
246
Mutation Information
DNA mutation:
None
Peptide Range:
21 ~ 45
Mut AA position:
33 (13 in Wild Type peptide)
Alignment
Wild Type:
"GAGQGSNGASVKCPVPCQTQTVCVT
||||||||||||.||||||||||||
Mutant:
GAGQGSNGASVKYPVPCQTQTVCVT"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) C1orf68

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay