Immunogenicity 4804

summary
Sample ID
4032
Response
Negative
Tumor Type
Colon cancer
Gene Symbol
ZNF575
Transcript ID
NM_174945
HLA INFO
C*06:02
TCR INFO

No TCR info found!

T cell Tumor cell C*06:02
sequence
Full length protein sequence (245 aa)
MLERG
1
AESAA
6
GATDP
11
SPTGK
16
EPVTK
21
EAPHQ
26
GPPQK
31
PSQSA
36
PGPTA
41
SAGSP
46
PRPRR
51
RPPPQ
56
RPHRC
61
PDCDK
66
AFSYP
71
SKLAT
76
HRLAH
81
GGARP
86
HPCPD
91
CPKAF
96
SYPSK
101
LAAHR
106
LTHSG
111
ARPHP
116
CPHCP
121
KSFGH
126
RSKLA
131
AHLWT
136
HAPTR
141
PYPCP
146
DCPKS
151
FCYPS
156
KLAAH
161
RHTHH
166
ATDAR
171
PYPCP
176
HCPKA
181
FSFPS
186
KLAAH
191
RLCHD
196
PPTAP
201
GSQAT
206
AWHRC
211
SSCGQ
216
AFGQR
221
RLLLL
226
HQRSH
231
HQVEH
236
KGERD
241
Mutation Information
DNA mutation:
None
Peptide Range:
57 ~ 81
Mut AA position:
69 (13 in Wild Type peptide)
Alignment
Wild Type:
"PPPQRPHRCPDCDKAFSYPSKLATH
||||||||||||.||||||||||||
Mutant:
PPPQRPHRCPDCNKAFSYPSKLATH"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) ZNF575

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay