Immunogenicity 4929
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
HDAC4
Transcript ID
NM_006037
HLA INFO
DRB*15:02
TCR INFO
No TCR info found!
Full length protein sequence (1084 aa)
MSSQS
1
HPDGL
6
SGRDQ
11
PVELL
16
NPARV
21
NHMPS
26
TVDVA
31
TALPL
36
QVAPS
41
AVPMD
46
LRLDH
51
QFSLP
56
VAEPA
61
LREQQ
66
LQQEL
71
LALKQ
76
KQQIQ
81
RQILI
86
AEFQR
91
QHEQL
96
SRQHE
101
AQLHE
106
HIKQQ
111
QEMLA
116
MKHQQ
121
ELLEH
126
QRKLE
131
RHRQE
136
QELEK
141
QHREQ
146
KLQQL
151
KNKEK
156
GKESA
161
VASTE
166
VKMKL
171
QEFVL
176
NKKKA
181
LAHRN
186
LNHCI
191
SSDPR
196
YWYGK
201
TQHSS
206
LDQSS
211
PPQSG
216
VSTSY
221
NHPVL
226
GMYDA
231
KDDFP
236
LRKTA
241
SEPNL
246
KLRSR
251
LKQKV
256
AERRS
261
SPLLR
266
RKDGP
271
VVTAL
276
KKRPL
281
DVTDS
286
ACSSA
291
PGSGP
296
SSPNN
301
SSGSV
306
SAENG
311
IAPAV
316
PSIPA
321
ETSLA
326
HRLVA
331
REGSA
336
APLPL
341
YTSPS
346
LPNIT
351
LGLPA
356
TGPSA
361
GTAGQ
366
QDAER
371
LTLPA
376
LQQRL
381
SLFPG
386
THLTP
391
YLSTS
396
PLERD
401
GGAAH
406
SPLLQ
411
HMVLL
416
EQPPA
421
QAPLV
426
TGLGA
431
LPLHA
436
QSLVG
441
ADRVS
446
PSIHK
451
LRQHR
456
PLGRT
461
QSAPL
466
PQNAQ
471
ALQHL
476
VIQQQ
481
HQQFL
486
EKHKQ
491
QFQQQ
496
QLQMN
501
KIIPK
506
PSEPA
511
RQPES
516
HPEET
521
EEELR
526
EHQAL
531
LDEPY
536
LDRLP
541
GQKEA
546
HAQAG
551
VQVKQ
556
EPIES
561
DEEEA
566
EPPRE
571
VEPGQ
576
RQPSE
581
QELLF
586
RQQAL
591
LLEQQ
596
RIHQL
601
RNYQA
606
SMEAA
611
GIPVS
616
FGGHR
621
PLSRA
626
QSSPA
631
SATFP
636
VSVQE
641
PPTKP
646
RFTTG
651
LVYDT
656
LMLKH
661
QCTCG
666
SSSSH
671
PEHAG
676
RIQSI
681
WSRLQ
686
ETGLR
691
GKCEC
696
IRGRK
701
ATLEE
706
LQTVH
711
SEAHT
716
LLYGT
721
NPLNR
726
QKLDS
731
KKLLG
736
SLASV
741
FVRLP
746
CGGVG
751
VDSDT
756
IWNEV
761
HSAGA
766
ARLAV
771
GCVVE
776
LVFKV
781
ATGEL
786
KNGFA
791
VVRPP
796
GHHAE
801
ESTPM
806
GFCYF
811
NSVAV
816
AAKLL
821
QQRLS
826
VSKIL
831
IVDWD
836
VHHGN
841
GTQQA
846
FYSDP
851
SVLYM
856
SLHRY
861
DDGNF
866
FPGSG
871
APDEV
876
GTGPG
881
VGFNV
886
NMAFT
891
GGLDP
896
PMGDA
901
EYLAA
906
FRTVV
911
MPIAS
916
EFAPD
921
VVLVS
926
SGFDA
931
VEGHP
936
TPLGG
941
YNLSA
946
RCFGY
951
LTKQL
956
MGLAG
961
GRIVL
966
ALEGG
971
HDLTA
976
ICDAS
981
EACVS
986
ALLGN
991
ELDPL
996
PEKVL
1001
QQRPN
1006
ANAVR
1011
SMEKV
1016
MEIHS
1021
KYWRC
1026
LQRTT
1031
STAGR
1036
SLIEA
1041
QTCEN
1046
EEAET
1051
VTAMA
1056
SLSVG
1061
VKPAE
1066
KRPDE
1071
EPMEE
1076
EPPL
1081
Mutation Information
DNA mutation:
None
Peptide Range:
663 ~ 687
Mut AA position:
675 (13 in Wild Type peptide)
Alignment
Wild Type:
"LKHQCTCGSSSSHPEHAGRIQSIWS
||||||||||||.||||||||||||
Mutant:
LKHQCTCGSSSSPPEHAGRIQSIWS"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) HDAC4
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay