Immunogenicity 5014
Sample ID
3978
Response
Negative
Tumor Type
Bile duct cancer
Gene Symbol
IRX1
Transcript ID
NM_024337
HLA INFO
A*68:02
TCR INFO
No TCR info found!
Full length protein sequence (480 aa)
MSFPQ
1
LGYPQ
6
YLSAA
11
GPGAY
16
GGERP
21
GVLAA
26
AAAAA
31
AAASS
36
GRPGA
41
AELGG
46
GAGAA
51
AVTSV
56
LGMYA
61
AAGPY
66
AGAPN
71
YSAFL
76
PYAAD
81
LSLFS
86
QMGSQ
91
YELKD
96
NPGVH
101
PATFA
106
AHTAP
111
AYYPY
116
GQFQY
121
GDPGR
126
PKNAT
131
RESTS
136
TLKAW
141
LNEHR
146
KNPYP
151
TKGEK
156
IMLAI
161
ITKMT
166
LTQVS
171
TWFAN
176
ARRRL
181
KKENK
186
VTWGA
191
RSKDQ
196
EDGAL
201
FGSDT
206
EGDPE
211
KAEDD
216
EEIDL
221
ESIDI
226
DKIDE
231
HDGDQ
236
SNEDD
241
EDKAE
246
APHAP
251
AAPSA
256
LARDQ
261
GSPLA
266
AADVL
271
KPQDS
276
PLGLA
281
KEAPE
286
PGSTR
291
LLSPG
296
AAAGG
301
LQGAP
306
HGKPK
311
IWSLA
316
ETATS
321
PDGAP
326
KASPP
331
PPAGH
336
PGAHG
341
PSAGA
346
PLQHP
351
AFLPS
356
HGLYT
361
CHIGK
366
FSNWT
371
NSAFL
376
AQGSL
381
LNMRS
386
FLGVG
391
APHAA
396
PHGPH
401
LPAPP
406
PPQPP
411
VAIAP
416
GALNG
421
DKASV
426
RSSPT
431
LPERD
436
LVPRP
441
DSPAQ
446
QLKSP
451
FQPVR
456
DNSLA
461
PQEGT
466
PRILA
471
ALPSA
476
Mutation Information
DNA mutation:
None
Peptide Range:
176 ~ 200
Mut AA position:
188 (13 in Wild Type peptide)
Alignment
Wild Type:
"TWFANARRRLKKENKVTWGARSKDQ
||||||||||||.||||||||||||
Mutant:
TWFANARRRLKKGNKVTWGARSKDQ"
Science, 2015
Immunogenicity of somatic mutations in human gastrointestinal cancersGene Name (from Reference) IRX1
Checkpoint
Blockade
None
ACT
None
Vaccination
None
Curative
Effect
None
minimal_peptide
None
Antigen
Type
TMG RNA
T-cell
Source
TILs
APC
Type
autologous DCs
Assay
IFNg ELISPOT assay