Immunogenicity 5073

summary
Sample ID
3948
Response
Negative
Tumor Type
Esophageal cancer
Gene Symbol
AGAP11
Transcript ID
NM_133447
HLA INFO
A*02:01
TCR INFO

No TCR info found!

T cell Tumor cell A*02:01
sequence
Full length protein sequence (550 aa)
MTIIS
1
VTLEI
6
HHHIT
11
ERDAD
16
RSLTI
21
LDEQL
26
YSFAF
31
STVHI
36
TKKRN
41
GGGSL
46
NNYSS
51
SIPLT
56
PSTSQ
61
EDLYF
66
SVPPT
71
ANTPT
76
PICKQ
81
SMGWS
86
NLFTS
91
EKGSD
96
PDKGR
101
KALES
106
HADTI
111
GSGRA
116
IPIKQ
121
GMLLK
126
RSGKW
131
LKTWK
136
KKYVT
141
LCSNG
146
VLTYY
151
SSLGD
156
YMKNI
161
HKKEI
166
DLRTS
171
TIKVP
176
GKWPS
181
LATSA
186
CAPIS
191
SSKSN
196
GLSKD
201
MEALH
206
MSANS
211
DIGLG
216
DSICF
221
SPSIS
226
STTSP
231
KLNLP
236
PSPHA
241
NKKKH
246
LKKKS
251
TNNLK
256
DDGLS
261
STAEE
266
EEEKF
271
MIVSV
276
TGQTC
281
HFKAT
286
TYEER
291
DAWVQ
296
AIQSQ
301
ILASL
306
QSCES
311
SKSKS
316
QLTSQ
321
SEAMA
326
LQSIQ
331
NMRGN
336
SHCVD
341
CETQN
346
PKWAS
351
LNLGV
356
LMCIE
361
CSGIH
366
RSLGT
371
RLSRV
376
RSLEL
381
DDWPV
386
ELRKV
391
MSSIG
396
NDLAN
401
SIWEG
406
SSQGQ
411
TKPSI
416
ESTRE
421
EKERW
426
IRSKY
431
EHKLF
436
LAPLP
441
CTELS
446
LGQHL
451
LRATA
456
DEDLR
461
TAILL
466
LAHGS
471
REEVN
476
ETCGE
481
GDGCT
486
ALHLA
491
CRKGN
496
VVLAQ
501
LLIWY
506
GVDVM
511
ARDAH
516
GNTAL
521
TYARQ
526
ASSQE
531
CINVL
536
LQYGC
541
PDECV
546
Mutation Information
DNA mutation:
None
Peptide Range:
1 ~ 17
Mut AA position:
3 (3 in Wild Type peptide)
Alignment
Wild Type:
"MTIISVTLEIHHHITERDADRSLTI
||...||||||||||||
Mutant:
MTLKFVTLEIHHHITER--------"
reference

Science, 2015

Immunogenicity of somatic mutations in human gastrointestinal cancers

Gene Name (from Reference) AGAP11

clinic trial
Checkpoint Blockade

None

ACT

None

Vaccination

None

Curative Effect

None

experiment
minimal_peptide

None

Antigen Type

TMG RNA

T-cell Source

TILs

APC Type

autologous DCs

Assay

IFNg ELISPOT assay